1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GACATGTGAATCACTCGATCTTCTGGAAGAACCTGGCGCCCTCAAAAgtaagctagatctgctgggcacaaaacttttcttctcttgtgatttttag
species | Selaginella moellendorffii |
transcript | EFJ28961 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GACATGTGAATCACTCGATCTTCTGGAAGAACCTGGCGCCCTCAAAA AGTGGAGGTGGTGAGCCACCAGAGGGAAAGCTTGCTTCGGCGATCAAGGACEST: gi|169050436|gb|FE458854.1|FE458854
genomic: GACATGTGAATCACTCGATCTTCTGGAAGAACCTGGCGCCCTCAAAAgtaagctaga ... tgatttttagAGTGGAGGTGGTGAGCCACCAGAGGGAAAGCTTGCTTCGGCGATCAAGGAC
EST: GACATGTGAATCACTCGATCTTCTGGAAGAACCTGGCGCCCTCAAAA AGTGGAGGTGGTGAGCCACCAGAGGGAAAGCTTGCTTCGGCGATCAAGGAC
genomic: GACATGTGAATCACTCGATCTTCTGGAAGAACCTGGCGCCCTCAAAAgtaagctaga ... tgatttttagAGTGGAGGTGGTGAGCCACCAGAGGGAAAGCTTGCTTCGGCGATCAAGGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACATGTGAATCACTCGATCTTCTGGAAGAACCTGGCGCCCTCAAAAgtaagctagatctgctgggcacaaaacttttcttctcttgtgatttttag
- - - - - - - - - - - TGGAAG
- - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - AAGAAC