1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GCCTGCTTCCGGCAAAATTTTACTGTTGTCACAATATACGCATCACTGGGTGAGGAGGCCCTTGCTCACTCGCTCAATGAGgtatggcgcacatttttcccttcttttttagattttccctcactgccgttaacag
species | Selaginella moellendorffii |
transcript | EFJ27012 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CAATATACGCATCACTGGGTGAGGAGGCCCTTGCTCACTCGCTCAATGAG ACAGAGGCGACGACTGTGATCTGCGACGTCAAGCAGCTGCAAAAAATAATTEST: gi|169053815|gb|FE462895.1|FE462895
genomic: CAATATACGCATCACTGGGTGAGGAGGCCCTTGCTCACTCGCTCAATGAGgtatggcgca ... ccgttaacagACAGAGGCGACGACTGTGATCTGCGACGTCAAGCAGCTGCAAAAAATAATT
EST: CAATATACGCATCACTGGGTGAGGAGGCCCTTGCTCACTCGCTCAATGAG ACAGAGGCGACGACTGTGATCTGCGACGTCAAGCAGCTGCAAAAAATAATTEST: gi|169068348|gb|FE479172.1|FE479172
genomic: CAATATACGCATCACTGGGTGAGGAGGCCCTTGCTCACTCGCTCAATGAGgtatggcgca ... ccgttaacagACAGAGGCGACGACTGTGATCTGCGACGTCAAGCAGCTGCAAAAAATAATT
EST: GGCCCTTGCTCACTCGCTCAATGAG ACAGAGGCGACGACTGTGATCTGCGACGTCAAGCAGCTGCAAAAAATAATTEST: gi|169025464|gb|FE436078.1|FE436078
genomic: GGCCCTTGCTCACTCGCTCAATGAGgtatggcgca ... ccgttaacagACAGAGGCGACGACTGTGATCTGCGACGTCAAGCAGCTGCAAAAAATAATT
EST: CAATATACGCATCACTGGGTGAGGAGGCCCTTGCTCACTCGCTCAATGAG ACAGAGGCGACGACTGTGATCTGCGACGTCAAGCAGCTGCAAAAAATAATTEST: gi|169020907|gb|FE431985.1|FE431985
genomic: CAATATACGCATCACTGGGTGAGGAGGCCCTTGCTCACTCGCTCAATGAGgtatggcgca ... ccgttaacagACAGAGGCGACGACTGTGATCTGCGACGTCAAGCAGCTGCAAAAAATAATT
EST: CAATATACGCATCACTGGGTGAGGAGGCCCTTGCTCACTCGCTCAATGAG ACAGAGGCGACGACTGTGATCTGCGACGTCAAGCAGCTGCAAAAAATAATTEST: gi|169087630|gb|FE494669.1|FE494669
genomic: CAATATACGCATCACTGGGTGAGGAGGCCCTTGCTCACTCGCTCAATGAGgtatggcgca ... ccgttaacagACAGAGGCGACGACTGTGATCTGCGACGTCAAGCAGCTGCAAAAAATAATT
EST: CAATATACGCATCACTGGGTGAGGAGGCCCTTGCTCACTCGCTCAATGAG ACAGAGGCGACGACTGTGATCTGCGACGTCAAGCAGCTGCAAAAAATAATT
genomic: CAATATACGCATCACTGGGTGAGGAGGCCCTTGCTCACTCGCTCAATGAGgtatggcgca ... ccgttaacagACAGAGGCGACGACTGTGATCTGCGACGTCAAGCAGCTGCAAAAAATAATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCTGCTTCCGGCAAAATTTTACTGTTGTCACAATATACGCATCACTGGGTGAGGAGGCCCTTGCTCACTCGCTCAATGAGgtatggcgcacatttttcccttcttttttagattttccctcactgccgttaacag
- - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG