1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ACCCGGCTTGGCAATTTCCAGAGCATGGGAATTTTGCGATCGTTGAGACACATTCATAAGACCGAAGGCTTCTGGGGCCTCTACAGgtgcatcgcgattcttttctgttttgcttctgtttgtttgtctgagaaaaacgaaaagaagtcttcttcctgctagtttgattggaagtcatagattatt...
species | Selaginella moellendorffii |
transcript | EFJ26539 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CGATCGTTGAGACACATTCATAAGACCGAAGGCTTCTGGGGCCTCTACAG AGGCAACGGAGCAGCCGTGATAAGGATAGTTCCTTACGCGGCTTTGCATTTEST: gi|169030048|gb|FE440514.1|FE440514
genomic: CGATCGTTGAGACACATTCATAAGACCGAAGGCTTCTGGGGCCTCTACAGgtgcatcgcg ... attttggcagAGGCAACGGAGCAGCCGTGATAAGGATAGTTCCTTACGCGGCATTGCATTT
EST: CGATCGTTGAGACACATTCATAAGACCGAAGGCTTCTGGGGCCTCTACAG AGGCAACGGAGCAGCCGTGATAAGGATAGTTCCTTACGCGGCATTGCATTT
genomic: CGATCGTTGAGACACATTCATAAGACCGAAGGCTTCTGGGGCCTCTACAGgtgcatcgcg ... attttggcagAGGCAACGGAGCAGCCGTGATAAGGATAGTTCCTTACGCGGCATTGCATTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCCGGCTTGGCAATTTCCAGAGCATGGGAATTTTGCGATCGTTGAGACACATTCATAAGACCGAAGGCTTCTGGGGCCTCTACAGgtgcatcgcgattcttttctgttttgcttctgtttgtttgtctgagaaaaacgaaaagaagtcttcttcctgctagtttgattggaagtcatagattatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tttctgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttctgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tttgtct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - agaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaagaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tcttcct