1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTGCCCGTGCTAGAGACACCGGATGGTCCGATCAGTGAGAGCAATGCGATTGCTAGATACGgtgagaagatcctggttttggcaagagacgtactaacattgtttgctggattttcag
species | Selaginella moellendorffii |
transcript | EFJ26267 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGAGACACCGGATGGTCCGATCAGTGAGAGCAATGCGATTGCTAGATACG TGGCCAATCTCAAGGGAAAACTGACCGGGTCGACAGTGTATCAGACTEST: gi|169074789|gb|FE483749.1|FE483749
genomic: AGAGACACCGGATGGTCCGATCAGTGAGAGCAATGCGATTGCTAGATACGgtgagaagat ... ggattttcagTGGCCAATCTCAAGGGAAAACTGACCGGGTCGACAGTGTATCAGACT
EST: AGAGACACCGGATGGTCCGATCAGTGAGAGCAATGCGATTGCTAGATACG TGGCCAATCTCAAGGGAAAACTGACCGGGTCGACAGTGTATCAGACTEST: gi|169027515|gb|FE433748.1|FE433748
genomic: AGAGACACCGGATGGTCCGATCAGTGAGAGCAATGCGATTGCTAGATACGgtgagaagat ... ggattttcagTGGCCAATCTCAAGGGAAAACTGACCGGGTCGACAGTGTATCAGACT
EST: AGAGACACCGGATGGTCCGATCAGTGAGAGCAATGCGATTGCTAGATACG TGGCCAATCTCAAGGGAAAACTGACCGGGTCGACAGTGTATCAGACT
genomic: AGAGACACCGGATGGTCCGATCAGTGAGAGCAATGCGATTGCTAGATACGgtgagaagat ... ggattttcagTGGCCAATCTCAAGGGAAAACTGACCGGGTCGACAGTGTATCAGACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGCCCGTGCTAGAGACACCGGATGGTCCGATCAGTGAGAGCAATGCGATTGCTAGATACGgtgagaagatcctggttttggcaagagacgtactaacattgtttgctggattttcag
- - - - - - - - - - - - - - - - - - AGAGCA