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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TACCTGGACGAGAACAAGCAACTTATCCTGGCGATTCTAGACAACCAGAACCTGGGAAAGCTTCATGAATGCGCAGCgtaagcgtcgtctcctttttttcttccaaagcttgattgttttttctatggattggaaattcag

Basic information

species Selaginella moellendorffii
transcript EFJ24060
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ24060 (Selaginella moellendorffii), 5'ss of exon 2
lower sequence: PP1S107_190V6.1 (Physcomitrella patens), 5'ss of exon 2
TACCTGGACGAGAACAAGCAACTTATCCTGGCGATTCTAGACAACCAGAACCTGGGAAAGCTTCATGAATGCGCAGCgtaagcgtc--gtctcc--tttttttcttccaaagcttgattgttttttctatggattggaaattcag--------------------------------
|| ||||||||||||||||| |||||||| |||||||| ||||| || ||||| ||||||||  | ||||||||   ||| || ||     |||  |  | || |||   ||    || ||      | ||   || |    |||                                
TATCTGGACGAGAACAAGCAGCTTATCCTCGCGATTCTTGACAATCAAAACCTTGGAAAGCTGAACGAATGCGCTATgtacgcttctaacttccaatcatatttttcgttagtacaatagtagcaaatttgagctgaactaccaggaaaggagggaaccgtgcttatcgtttggtga