1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TGGGTATGGTGGGACTACGTTACTGATTTCCAGATCCGGTGTCCTATGAAGGAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTTCTCAAGGCTTTGGgtaagaacctgcttgtcttcacttatttcactgaaaactgtttctaatgttggcctcttctag
species | Selaginella moellendorffii |
transcript | EFJ22768 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GGAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTTCTCAAGGCTTTGG ATATTCCTGTGEST: gi|169096682|gb|FE496812.1|FE496812
genomic: GGAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTTCTCAAGGCTTTGGgtaagaacct ... cctcttctagATATTCCTGTG
EST: GGAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTTCTCAAGGCTTTGG ATATTCCTGTGCACAAGGTGCGCGACTGTATGGGGAATCCAAACGACGACAEST: gi|169083004|gb|FE488526.1|FE488526
genomic: GGAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTTCTCAAGGCTTTGGgtaagaacct ... cctcttctagATATTCCTGTGCACAAGGTGCGCGACTGTATGGGGAATCCAAACGACGACA
EST: GAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTTTCTCA-GGCTTTGG ATATTCCTGTGCANCA-GGTGCGCGACTGTATGGGGAATCCAAACGAEST: gi|169092914|gb|FE495208.1|FE495208
genomic: GAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTT-CTCAAGGCTTTGGgtaagaacct ... cctcttctagATATTCCTGTGCA-CAAGGTGCGCGACTGTATGGGGAATCCAAACGA
EST: GGAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTTCTCAAGGCTTTGG ATATTCCTGTGCACAAGGTGCGCGACTGTATGGNGAATCCAAACGACGACNEST: gi|169096538|gb|FE499450.1|FE499450
genomic: GGAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTTCTCAAGGCTTTGGgtaagaacct ... cctcttctagATATTCCTGTGCACAAGGTGCGCGACTGTATGGGGAATCCAAACGACGACA
EST: TTCTCAAGGCTTTGG ATATTCCTGTGCACAAGGTGCGCTACTGTATGGGGAATCCAAACGACGACAEST: gi|169050286|gb|FE458353.1|FE458353
genomic: TTCTCAAGGCTTTGGgtaagaacct ... cctcttctagATATTCCTGTGCACAAGGTGCGCGACTGTATGGGGAATCCAAACGACGACA
EST: GGAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTTCTCAAGGCTTTGG ATATTCCTGTGCACAAGGTGCGCGACTGTATGGGGAATCCAAACGACGACAEST: gi|169081076|gb|FE486141.1|FE486141
genomic: GGAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTTCTCAAGGCTTTGGgtaagaacct ... cctcttctagATATTCCTGTGCACAAGGTGCGCGACTGTATGGGGAATCCAAACGACGACA
EST: GGAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTTCTCAAGGCTTTGG ATATTCCTGTGCACAAGGTGCGCGACTGTATGGGGAATCCAAACGACGACA
genomic: GGAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTTCTCAAGGCTTTGGgtaagaacct ... cctcttctagATATTCCTGTGCACAAGGTGCGCGACTGTATGGGGAATCCAAACGACGACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGGTATGGTGGGACTACGTTACTGATTTCCAGATCCGGTGTCCTATGAAGGAGATGAAGTACAATGAGGCTTGCGCGGAGGACGTTCTCAAGGCTTTGGgtaagaacctgcttgtcttcacttatttcactgaaaactgtttctaatgttggcctcttctag
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA