1 5' 3' | 2 5' 3' | 3 5' 3' |
GCTTATACAGTCGAGTTGGAGGCCGAGGTGACACAACTCAAGGAAGAGAACATGAAACTCCGGAAAATGCAGgtaagaaacgagtttttcttacgtgatttctctgtgggatcgcttcatgagtcgatcgtttcgtttcgtgggctttctcatctaaacctcccaaacggttttgcttttctgctttccag
species | Selaginella moellendorffii |
transcript | EFJ21671 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CCGAGGTGACACAACTCAAGGAAGAGAACATGAAACTCCGGAAAATGCAG GAGGAGGAGAACATCAAGCGAAAGAAACAGEST: gi|169044550|gb|FE451122.1|FE451122
genomic: CCGAGGTGACACAACTCAAGGAAGAGAACATGAAACTCCGGAAAATGCAGgtaagaaacg ... tgctttccagGAGGAGGAGAACATCAAGCGAAAGAAACAG
EST: CCGAGGTGACACAACTCAAGGAAGAGAACATGAAACTCCGGAAAATGCAG GAGGAGGAGAACATCAAGCGAAAGAAACAG
genomic: CCGAGGTGACACAACTCAAGGAAGAGAACATGAAACTCCGGAAAATGCAGgtaagaaacg ... tgctttccagGAGGAGGAGAACATCAAGCGAAAGAAACAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTTATACAGTCGAGTTGGAGGCCGAGGTGACACAACTCAAGGAAGAGAACATGAAACTCCGGAAAATGCAGgtaagaaacgagtttttcttacgtgatttctctgtgggatcgcttcatgagtcgatcgtttcgtttcgtgggctttctcatctaaacctcccaaacggttttgcttttctgctttccag
- - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - AAGAGA