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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCACTTACGAGAAGGCATTGGTTTCGGAGTGTCGAGCAGCTCAAAAGGCCGAGTTTCCGAAAGATTTCATGGGACCAGTTCTACACCTGGTCCAATTTAgtaagtgatcgacttggaattttgttctgtaacatattgtcctatttctgccag

Basic information

species Selaginella moellendorffii
transcript EFJ19453
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169099829|gb|FE500834.1|FE500834
EST:     CGAGTTTCCGAAAGATTTCATGGGACCAGTTCTACACCTGGTCCAATTTA                         GTGAGCTTGAGATCGATGAGCTCGTTGACCACGTTTTTACGACTCTCAGCG
genomic: CGAGTTTCCGAAAGATTTCATGGGACCAGTTCTACACCTGGTCCAATTTAgtaagtgatc ... tttctgccagGTGAGCTTGAGACCGATGAGCTCGTTGACCACGTTTTTACGACTCTCAGCG
EST: gi|169059326|gb|FE468001.1|FE468001
EST:     CGAGTTTCCGAAAGATTTCATGGGACCAGTTCTACACCTGGTCCAATTTA                         GTGAGCTTGAGACCGATGAGCTCGTTGACCACGTTTTTACGACTCTCAGCG
genomic: CGAGTTTCCGAAAGATTTCATGGGACCAGTTCTACACCTGGTCCAATTTAgtaagtgatc ... tttctgccagGTGAGCTTGAGACCGATGAGCTCGTTGACCACGTTTTTACGACTCTCAGCG