1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
GGGACTGCTTTGCCGCCAACTGAAAGGGACAGGCTGGGACTCCGCGGACTTCTTCCACCGCGTGTGATGACCCCTCAACAGCAGATTGACCGTTTTAgtgagtgatctttcgacaaactaggctagcttggaaatgttcttacgcggtcctatcttaccag
species | Selaginella moellendorffii |
transcript | EFJ19450 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ACTTCTTCCACCGCGTGTGATGACCCCTCAACAGCAGATTGACCGTTTTA TGAGCGATTTTAAGTCTTTGGAAAGAACCACCAGAGATGGCCCCAGAGATAEST: gi|169088831|gb|FE494395.1|FE494395
genomic: ACTTCTTCCACCGCGTGTGATGACCCCTCAACAGCAGATTGACCGTTTTAgtgagtgatc ... atcttaccagTGAGCGATTTTAAGTCTTTGGAAAGAACCACCAGAGATGGTCCCAGAGATA
EST: ACTTCTTCCACCGCGTGTGATGACCCCTCAACAGCAGATTGACCGTTTTA TGAGCGATTTTAAGTCTTTGGAAAGAACCACCAGAGATGGCCCCAGAGATAEST: gi|169073338|gb|FE481102.1|FE481102
genomic: ACTTCTTCCACCGCGTGTGATGACCCCTCAACAGCAGATTGACCGTTTTAgtgagtgatc ... atcttaccagTGAGCGATTTTAAGTCTTTGGAAAGAACCACCAGAGATGGTCCCAGAGATA
EST: ACTTCTTCCACCGCGTGTGATGACCCCTCAACAGCAGATTGACCGTTTTA TGAGCGATTTTAAGTCTTTGGAAAGAACCACCAGAGATGGCCCCAGAGATAEST: gi|169022198|gb|FE431807.1|FE431807
genomic: ACTTCTTCCACCGCGTGTGATGACCCCTCAACAGCAGATTGACCGTTTTAgtgagtgatc ... atcttaccagTGAGCGATTTTAAGTCTTTGGAAAGAACCACCAGAGATGGTCCCAGAGATA
EST: ACTTCTTCCACCGCGTGTGATGACCCCTCAACAGCAGATTGACCGTTTTA TGAGCGATTTTAAGTCTTTGGAAAGAACCACCAGAGATGGCCCCAGAGATAEST: gi|169056297|gb|FE464107.1|FE464107
genomic: ACTTCTTCCACCGCGTGTGATGACCCCTCAACAGCAGATTGACCGTTTTAgtgagtgatc ... atcttaccagTGAGCGATTTTAAGTCTTTGGAAAGAACCACCAGAGATGGTCCCAGAGATA
EST: ACTTCTTCCACCGCGTGTGATGACCCCTCAACAGCAGATTGACCGTTTTA TGAGCGATTTTAAGTCTTTGGAAAGAACCACCAGAGATGGCCCCAGAGATA
genomic: ACTTCTTCCACCGCGTGTGATGACCCCTCAACAGCAGATTGACCGTTTTAgtgagtgatc ... atcttaccagTGAGCGATTTTAAGTCTTTGGAAAGAACCACCAGAGATGGTCCCAGAGATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGACTGCTTTGCCGCCAACTGAAAGGGACAGGCTGGGACTCCGCGGACTTCTTCCACCGCGTGTGATGACCCCTCAACAGCAGATTGACCGTTTTAgtgagtgatctttcgacaaactaggctagcttggaaatgttcttacgcggtcctatcttaccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT