1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CGACGAGAATGGCACGGCCGCTGTTCGCCCCGGCTCGGGTTTAACTGTAGCAGTGAAGCAGCTGAATCCGGAAGGATTCCAAGGCCACCGAGAATGGCTGgtaagttctagtctgcgaagaaaacaccggttttgttgacggaatggatgaaacttacag
species | Selaginella moellendorffii |
transcript | EFJ19239 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CAGTGAAGCAGCTGAATCCGGAAGGATTCCAAGGCCACCGAGAATGGCTG GCGGAGGTGAATTTTCTCGGCCAGCTTCACCATTTCAATCTCGTAAAGTTGEST: gi|169080377|gb|FE488939.1|FE488939
genomic: CAGTGAAGCAGCTGAATCCGGAAGGATTCCAAGGCCACCGAGAATGGCTGgtaagttcta ... aaacttacagGCGGAGGTGAATTTTCTCGGCCAGCTTCACCACTTCAATCTCGTAAAGTTG
EST: CAGTGAAGCAGCTGAATCCGGAAGGATTCCAAGGCCACCGAGAATGGCTG GCGGAGGTGAATTTTCTCGGCCAGCTTCACCATTTCAATCTCGTANAGTTGEST: gi|169095415|gb|FE497521.1|FE497521
genomic: CAGTGAAGCAGCTGAATCCGGAAGGATTCCAAGGCCACCGAGAATGGCTGgtaagttcta ... aaacttacagGCGGAGGTGAATTTTCTCGGCCAGCTTCACCACTTCAATCTCGTAAAGTTG
EST: CAGTGAAGCAGCTGAATCCGGAAGGATTCCAAGGCCACCGAGAATGGCTG GCGGAGGTGAATTTTCTCGGCCAGCTTCACCACTTCAATCTCGTAAAGTTGEST: gi|169021113|gb|FE431424.1|FE431424
genomic: CAGTGAAGCAGCTGAATCCGGAAGGATTCCAAGGCCACCGAGAATGGCTGgtaagttcta ... aaacttacagGCGGAGGTGAATTTTCTCGGCCAGCTTCACCACTTCAATCTCGTAAAGTTG
EST: CAGTGAAGCAGCTGAATCCGGAAGGATTCCAAGGCCACCGAGAATGGCTG GCGGAGGTGAATTTTCTCGGCCAGCTTCACCACTTCAATCTCGTANAGTTGEST: gi|169080967|gb|FE489217.1|FE489217
genomic: CAGTGAAGCAGCTGAATCCGGAAGGATTCCAAGGCCACCGAGAATGGCTGgtaagttcta ... aaacttacagGCGGAGGTGAATTTTCTCGGCCAGCTTCACCACTTCAATCTCGTAAAGTTG
EST: CAGTGAAGCAGCTGAATCCGGAAGGATTCCAAGGCCACCGAGAATGGCTG GCGGAGGTGAATTTTCTCGGCCAGCTTCACCATTTCAATCTCGTAAAGTTG
genomic: CAGTGAAGCAGCTGAATCCGGAAGGATTCCAAGGCCACCGAGAATGGCTGgtaagttcta ... aaacttacagGCGGAGGTGAATTTTCTCGGCCAGCTTCACCACTTCAATCTCGTAAAGTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGACGAGAATGGCACGGCCGCTGTTCGCCCCGGCTCGGGTTTAACTGTAGCAGTGAAGCAGCTGAATCCGGAAGGATTCCAAGGCCACCGAGAATGGCTGgtaagttctagtctgcgaagaaaacaccggttttgttgacggaatggatgaaacttacag
- - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA