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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AACGAGCCTACGGCGGCGTCTCTGGCTTATGGTTTCGACAAGAAAGCCAACGAGACCATCTTGGTTTTCGATCTGGGGGGTGGTACATTTGATGTTTCAGgtatacaaaactatttcgctctctatctcgcactggtttgatgatgtcactgtgctgttctgatttag

Basic information

species Selaginella moellendorffii
transcript EFJ15775
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ15775 (Selaginella moellendorffii), 5'ss of exon 2
lower sequence: Vv18s0041g01230.t01 (Vitis vinifera), 5'ss of exon 2
AACGAGCCTACGGCGGCGTCTCTGGCTTATGGTTTCGACAAGAAAGCCAACGAGACCATCTTGGTTTTCGATCTGGGGGGTGGTACATTTGATGTTTCAGgtatacaaaactatttcgctctctatctcgcactggtttgatgatgtca---ctgtgctgttctgatttag------------------------------
|| || ||||| || || || ||||| |||||||| || |||||    || || || ||  | || || ||||| || ||||||||||||||||||||||||||  | ||  ||||    |||  | ||   |   |  | ||   ||    ||| |   || | |   |                               
AATGAACCTACTGCAGCTTCACTGGCATATGGTTTTGAAAAGAAGAATAATGAAACAATTCTTGTATTTGATCTTGGAGGTGGTACATTTGATGTTTCAGgtatg-agaatcattttaagctcattttcatccaaatcaggtggaatcgattctgagaccttttaaggaaataagtttgttaatttttatgccatctcatc