1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ATTCGGACACCCGGCCCGGGATACACTTGCGGTCCGGCTAAGAAGGTGAAAGCCAGCTTGTTTCCATCCGCGGATGGTCGGAGACACACACAAGCTCTGAgtgagtcactctttctttgcttctttcgtttcttttgctcttgctcgcttacgaactttggtggtggcgcag
species | Selaginella moellendorffii |
transcript | EFJ11028 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGCCAGCTTGTTTCCATCCGCGGATGGTCGGAGACACACACAAGCTCTGA TGACTTGGAACGTGACTTGCTCGTACTCCCAGTACCTGGCACAGAGGGCTCEST: gi|169077320|gb|FE485622.1|FE485622
genomic: AGCCAGCTTGTTTCCATCCGCGGATGGTCGGAGACACACACAAGCTCTGAgtgagtcact ... ggtggcgcagTGACTTGGAACGTGACTTGCTCGTACTCCCAGTACCTGGCACAGAGGGCTC
EST: AGCCAGCTTGTTTCCATCCGCGGATGGTCGGAGACACACACAAGCTCTGA TGACTTGGAACGTGACTTGCTCGTACTCCCAGTACCTGGCACAGAGGGCTC
genomic: AGCCAGCTTGTTTCCATCCGCGGATGGTCGGAGACACACACAAGCTCTGAgtgagtcact ... ggtggcgcagTGACTTGGAACGTGACTTGCTCGTACTCCCAGTACCTGGCACAGAGGGCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTCGGACACCCGGCCCGGGATACACTTGCGGTCCGGCTAAGAAGGTGAAAGCCAGCTTGTTTCCATCCGCGGATGGTCGGAGACACACACAAGCTCTGAgtgagtcactctttctttgcttctttcgtttcttttgctcttgctcgcttacgaactttggtggtggcgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT