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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGATAATGGAAGCATCTGGTTCTGGGATTGGACGAGCGGCCATAACTTCCAGCAAACTCAAACCATCGTTCAGCCAGgtacgcattttggtggggaagtggtccaggttgcgtaactcttgctcatggcag

Basic information

species Selaginella moellendorffii
transcript EFJ31158
intron # 17
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ31158 (Selaginella moellendorffii), 5'ss of exon 17
lower sequence: GLYMA15G15960.2 (Glycine max), 5'ss of exon 15
GTGATAATGGAAGCATCTGGTTCTGGGATTGGACGAGCGGCCATAACTTCCAGCAAACTCAAACCATCGTTCAGCCAGgtacgcattttggtggggaagtggtcca--ggttgcgtaactcttgctcatggcag---------------------------------------------------------------
|||| ||||| ||||| |||||||||||||||| ||| || ||||| ||||||||| | ||||| || || ||||| ||||  ||  || |   |    | |   |   |||   |  | |||  |  |  ||                                                                
GTGACAATGGCAGCATGTGGTTCTGGGATTGGAAGAGTGGTCATAATTTCCAGCAATCCCAAACAATTGTACAGCCTGgtatccaagtttggctgctcttagatgattagttatttgccacttagttctatcatacccgtaagattgactagtataattatttgctttcctctttcctcaacctccccctcttacag