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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGGCAAAAGAGTCGTGTCGCTTTTGCAAAAATCACATTCAACAAACCACACATTCTTTTACTGGATGAGCCTTCGAATCACCTTgtaagaatctgctattgtcttccaacactatcttgatattgccgtttgcatgcttatag

Basic information

species Selaginella moellendorffii
transcript EFJ22634
intron # 16
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ22634 (Selaginella moellendorffii), 5'ss of exon 16
lower sequence: PP1S47_97V6.1 (Physcomitrella patens), 5'ss of exon 16
GTGGGCAAAAGAGTCGTGTCGCTTTTGCAAAAATCACATTCAACAAACCACACATTCTTTTACTGGATGAGCCTTCGAATCACCTTgtaagaatctgctattgtcttccaa----cactatcttgatattgccgtttgcatgcttatag---------------------------------------
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GTGGTCAAAAGAGTAGGGTAGCTTTTGCAAAAATCACTTTCAACAAGCCTCATATATTACTGCTGGATGAGCCATCCAATCACTTGgtaa--attttctctcagcgaataaacgtcacacgttgaacctttacaaaagcatttttgtaaagatttgcattactatttgctttgctggccactttgagt