1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
ATCTTATGGAAAAGCTGGTTTGAACTTGTACGATGAAGCACCTTCGGTGAAGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAGgtgactttttggtatcgatttttccttacagtaaccattgcataacag
species | Selaginella moellendorffii |
transcript | EFJ32660 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAG GTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCAEST: gi|169071159|gb|FE477836.1|FE477836
genomic: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAGgtgacttttt ... tgcataacagGTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCA
EST: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAG GTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCAEST: gi|169111105|gb|FE514242.1|FE514242
genomic: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAGgtgacttttt ... tgcataacagGTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCA
EST: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAG GTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCAEST: gi|169071160|gb|FE477837.1|FE477837
genomic: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAGgtgacttttt ... tgcataacagGTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCA
EST: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAG GTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCAEST: gi|169111104|gb|FE514241.1|FE514241
genomic: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAGgtgacttttt ... tgcataacagGTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCA
EST: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACTCGTTGACAAG GTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGTGAGTGCCAEST: gi|169083988|gb|FE493628.1|FE493628
genomic: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAGgtgacttttt ... tgcataacagGTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCA
EST: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAG GTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCAEST: gi|169036112|gb|FE445659.1|FE445659
genomic: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAGgtgacttttt ... tgcataacagGTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCA
EST: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAG GTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCAEST: gi|169030220|gb|FE437098.1|FE437098
genomic: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAGgtgacttttt ... tgcataacagGTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCA
EST: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAG GTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCA
genomic: AGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAGgtgacttttt ... tgcataacagGTTCAAGTACCAACAATGTTTCTACTTGGTGCACAGGATCGGAGAGTGCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCTTATGGAAAAGCTGGTTTGAACTTGTACGATGAAGCACCTTCGGTGAAGCACTTGGGAGCTTTTTATCAAGCGTCTCCAATAGCACACGTTGACAAGgtgactttttggtatcgatttttccttacagtaaccattgcataacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT