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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCGAAGCTAGTCGGTACAGACGACTTCTCTGGGCCTACTCCAGCCCCACAGGGCGCTCATATTGATCATTCCTTTCCCTTCTTGGAATCTTTGAATGAGgtacgccttgcctgtggatgtctgtttcgtttttcttctttaactttttgcatctggcag

Basic information

species Selaginella moellendorffii
transcript EFJ26064
intron # 14
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ26064 (Selaginella moellendorffii), 5'ss of exon 14
lower sequence: PP1S45_273V6.1 (Physcomitrella patens), 5'ss of exon 13
TGCGAAGCTAGTCGGTACAGACGACTTCTCTGGGCCTACTCCAGCCCCACAGGGCGCTCATATTGATCATTCCTTTCCCTTCTTGGAATCTTTGAATGAGgtacgccttgcct---------gtggat-gtctgtttcgtttttcttctttaactttttgcatctggcag------------------------------------
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AATGAAGTTGGTTGGCAATGACGACTTTTCCGGGCCTGCTCCAACACCACATGGAGCTCTTATCGATCATTCCTTTCCATTTTTGGAATCTCTAAATGAGgtttaccatcctttcaaaccatatggattgcttggttagtcttttgttccaaattagattcacttagttgtttaatctgcttagaacctgaagttcttcgatacag