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TGATGTTGTGCATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAGgtatgatagaaatttttcaagaactccaatgattttaatcaaggactatgcactggctttggcacttgattatag
species | Selaginella moellendorffii |
transcript | EFJ22660 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: AATAACAACGATCGCAG ATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCCEST: gi|169029631|gb|FE437302.1|FE437302
genomic: AATAACAACGATCGCAGgtatgataga ... ttgattatagATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCC
EST: GTACATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATTGCAG ATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCCEST: gi|169031502|gb|FE438967.1|FE438967
genomic: GTGCATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAGgtatgataga ... ttgattatagATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCC
EST: GTGCATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAG ATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCCEST: gi|169104812|gb|FE508709.1|FE508709
genomic: GTGCATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAGgtatgataga ... ttgattatagATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCC
EST: GTACATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAG ATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCCEST: gi|169079022|gb|FE488585.1|FE488585
genomic: GTGCATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAGgtatgataga ... ttgattatagATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCC
EST: GTGCATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAG ATGGAATCTAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCCEST: gi|169115579|gb|FE517789.1|FE517789
genomic: GTGCATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAGgtatgataga ... ttgattatagATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCC
EST: GTACATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAG ATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCCEST: gi|169055154|gb|FE461041.1|FE461041
genomic: GTGCATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAGgtatgataga ... ttgattatagATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCC
EST: GTACATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAG ATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCCEST: gi|169115578|gb|FE517788.1|FE517788
genomic: GTGCATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAGgtatgataga ... ttgattatagATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCC
EST: GTACATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAG ATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCCEST: gi|169071666|gb|FE477095.1|FE477095
genomic: GTGCATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAGgtatgataga ... ttgattatagATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCC
EST: GTACATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAG ATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCCEST: gi|169054490|gb|FE462158.1|FE462158
genomic: GTGCATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAGgtatgataga ... ttgattatagATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCC
EST: GTACATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAG ATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCC
genomic: GTGCATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAGgtatgataga ... ttgattatagATGGAATCCAGATTCTATAGTCTACGACTCGTGGCAATCGTATGGAACGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATGTTGTGCATATGACAAGCTACGCTCCCCTCTTTGTAAATAACAACGATCGCAGgtatgatagaaatttttcaagaactccaatgattttaatcaaggactatgcactggctttggcacttgattatag
- - - - - - - - CAAGCT