1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' |
GAGTGCATCTGATATTGTTCTAACTGAGCCCGGCCTTAGTGTGATTATCAGTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACGgtaagcagcgttgcaacgtctttacttctctaaactataagctgtctccacag
species | Selaginella moellendorffii |
transcript | EFJ18860 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGANAAACTACACG ATTTATGCCGTGTCGATCACAATCCEST: gi|169114143|gb|FE516822.1|FE516822
genomic: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACGgtaagcagcg ... gtctccacagATTTATGCCGTGTCGATCACAATCC
EST: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACG ATTTATGCCGTGTCGATCACAATCCGTATAGTGEST: gi|169107442|gb|FE508311.1|FE508311
genomic: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACGgtaagcagcg ... gtctccacagATTTATGCCGTGTCGATCACAATCCGTATAGTG
EST: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACG ATTTATGCCGTGTCGATCACAATCCGTATAGTGEST: gi|169026011|gb|FE434454.1|FE434454
genomic: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACGgtaagcagcg ... gtctccacagATTTATGCCGTGTCGATCACAATCCGTATAGTG
EST: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACG ATTTATGCCGTGTCGATCACAATCCEST: gi|169096134|gb|FE500294.1|FE500294
genomic: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACGgtaagcagcg ... gtctccacagATTTATGCCGTGTCGATCACAATCC
EST: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACG ATTTATGCCGTGTCGATCACAATCCGTATAGTGEST: gi|169022707|gb|FE429734.1|FE429734
genomic: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACGgtaagcagcg ... gtctccacagATTTATGCCGTGTCGATCACAATCCGTATAGTG
EST: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACG ATTTATGCCGTGTCGATCACAATCCGTATAGTGEST: gi|169027227|gb|FE436125.1|FE436125
genomic: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACGgtaagcagcg ... gtctccacagATTTATGCCGTGTCGATCACAATCCGTATAGTG
EST: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGANAAACTACACG ATTTATGCCGTGTCGATCACAATCCGTATAGTGEST: gi|169029737|gb|FE438344.1|FE438344
genomic: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACGgtaagcagcg ... gtctccacagATTTATGCCGTGTCGATCACAATCCGTATAGTG
EST: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACG ATTTATGCCGTGTCGATCACAATCCGTATAGTG
genomic: GTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACGgtaagcagcg ... gtctccacagATTTATGCCGTGTCGATCACAATCCGTATAGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGTGCATCTGATATTGTTCTAACTGAGCCCGGCCTTAGTGTGATTATCAGTGCTGTTCTTACCAGCCGTGCTATCTTCCAGCGTATGAAAAACTACACGgtaagcagcgttgcaacgtctttacttctctaaactataagctgtctccacag
- - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT