1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
GTTCTAGCCAACTTCCTGTCTACGCCTCTAGCAAATGGTCCTGGCGGTGATGTTGAAGGCTGGCCATATCTAGCATTTGATCTTGATCCTAACCGCgtgaaggcaagctgaagttagaactacaagaagctttttgtttctcatctcttctatcag
species | Selaginella moellendorffii |
transcript | EFJ10924 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: GTGATGTTGAAGGCTGCCCATATCTAGCATTTGATCTTGATCCTAACCGC GTGAAGGTGTCTAGGACGCTGGGCTTTCCTGTCCTGTATGGAGATGGATCAEST: gi|169094858|gb|FE491618.1|FE491618
genomic: GTGATGTTGAAGGCTGGCCATATCTAGCATTTGATCTTGATCCTAACCGCgtgaaggcaa ... cttctatcagGTG----T--CTAGGACGCTGGGCTTTCCTGTCCTGTATGGAGATGGATCA
EST: GTGATGTTGAAGGCTGGCCATATCTAGCATTTGATCTTGATCCTAACCGC GTGAAGGTGTCTAGGACGCTGGGCTTTCCTGTCCTGTATGGAGATGGATCAEST: gi|169093394|gb|FE492698.1|FE492698
genomic: GTGATGTTGAAGGCTGGCCATATCTAGCATTTGATCTTGATCCTAACCGCgtgaaggcaa ... cttctatcagGTG----T--CTAGGACGCTGGGCTTTCCTGTCCTGTATGGAGATGGATCA
EST: GTGATGTTGAAGGCTGGCCATATCTAGCATTTGATCTTGATCCTAACCGC GTGAAGGTGTCTAGGACGCTGGGCTTTCCTGTCCTGTATGGAGATGGATCAEST: gi|169098684|gb|FE498584.1|FE498584
genomic: GTGATGTTGAAGGCTGGCCATATCTAGCATTTGATCTTGATCCTAACCGCgtgaaggcaa ... cttctatcagGTG----T--CTAGGACGCTGGGCTTTCCTGTCCTGTATGGAGATGGATCA
EST: GTGATGTTGAAGGCTGGCCATATCTAGCATTTGATCTTGATCCTAACCGC GTGAAGGTGTCTAGGACGCTGGGCTTTCCTGTCCTGTATGGAGATGGATCAEST: gi|169080477|gb|FE488454.1|FE488454
genomic: GTGATGTTGAAGGCTGGCCATATCTAGCATTTGATCTTGATCCTAACCGCgtgaaggcaa ... cttctatcagGTG----T--CTAGGACGCTGGGCTTTCCTGTCCTGTATGGAGATGGATCA
EST: TGATGT-GAAAGGCTGGCCATATCTAGCATTTGATCTTGATCCTAACCGC GTGAAGGTGTCTAGGACGCTGGGCTTTCCTGTCCTGTATGGAGATGGATCA
genomic: TGATGTTGAA-GGCTGGCCATATCTAGCATTTGATCTTGATCCTAACCGCgtgaaggcaa ... cttctatcagGTG----T--CTAGGACGCTGGGCTTTCCTGTCCTGTATGGAGATGGATCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCTAGCCAACTTCCTGTCTACGCCTCTAGCAAATGGTCCTGGCGGTGATGTTGAAGGCTGGCCATATCTAGCATTTGATCTTGATCCTAACCGCgtgaaggcaagctgaagttagaactacaagaagctttttgtttctcatctcttctatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG