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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTATCAATTGGCTGAGGACTTGGGACGTGCCTTCTCTGAGCGTTCGGTTTTGGAAAGCATTCTAAGCGTAGAAAACTCTCTCGCCCCAAGCCCTGAGAAGgtaccagtgttttcagaatcttgcgaaataacaagccatcctttcgaacag

Basic information

species Selaginella moellendorffii
transcript EFJ04838
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169097813|gb|FE498242.1|FE498242
EST:     TGGAAAGCATTCTAAGCGTAGAAAACTCTCTCGCCCCAAGCCCTGAGAAG                         ACAATTCTGGGCTTGTTGCGCTCATTATTTGTAGCTACGACAGTGGACGAA
genomic: TGGAAAGCATTCTAAGCGTAGAAAACTCTCTCGCCCCAAGCCCTGAGAAGgtaccagtgt ... tttcgaacagACAATTCTGGGCTTGTTGCGCTCATTATTTGTAGCTACGACAGTGGACGAA
EST: gi|169035852|gb|FE446259.1|FE446259
EST:     TGGAAAGCATTCTAAGCGTAGAAAACTCTCTCGCCCCAAGCCCTGAGAAG                         ACAATTCTGGGCTTGTTGCGCTCATTATTTGTAGCTACGACAGTGGACGAA
genomic: TGGAAAGCATTCTAAGCGTAGAAAACTCTCTCGCCCCAAGCCCTGAGAAGgtaccagtgt ... tttcgaacagACAATTCTGGGCTTGTTGCGCTCATTATTTGTAGCTACGACAGTGGACGAA