1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
AGCTACGACCCAACCACACACTTTGAGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAGgtatggtttgtaataattctggcgccaacatctcacatctaaattccgcag
species | Selaginella moellendorffii |
transcript | EFJ11673 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAG GTCCTAGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGAEST: gi|169038887|gb|FE449604.1|FE449604
genomic: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAGgtatggtttg ... aattccgcagGTCCTGGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGA
EST: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAG GTCCTAGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGAEST: gi|169070710|gb|FE477309.1|FE477309
genomic: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAGgtatggtttg ... aattccgcagGTCCTGGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGA
EST: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAG GTCCTAGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGAEST: gi|169093396|gb|FE492700.1|FE492700
genomic: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAGgtatggtttg ... aattccgcagGTCCTGGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGA
EST: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAG GTCCTGGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGAEST: gi|169092637|gb|FE493657.1|FE493657
genomic: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAGgtatggtttg ... aattccgcagGTCCTGGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGA
EST: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAG GTCCTAGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGAEST: gi|169038296|gb|FE445308.1|FE445308
genomic: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAGgtatggtttg ... aattccgcagGTCCTGGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGA
EST: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAG GTCCTAGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGAEST: gi|169083494|gb|FE491925.1|FE491925
genomic: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAGgtatggtttg ... aattccgcagGTCCTGGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGA
EST: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAG GTCCTAGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGA
genomic: AGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAGgtatggtttg ... aattccgcagGTCCTGGACTTGAGTGTGGACTTGAGTGCCGCCAGTGCTGCGGACGAGTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCTACGACCCAACCACACACTTTGAGACTACAGTGCAAGATGTTCTTGCCATGTACACCCGCATAACCGGAAAGgtatggtttgtaataattctggcgccaacatctcacatctaaattccgcag
- - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - AAGATG