Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   		15  
 5'  3'   		16  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCTATACGTCTGCAAACACTTTGTTCTCGATGGTTCATAAATTCAATCACGTTTCCAGGGATGGTCCGAAGgtatcagatgtgattacaagcaccggtatatttattgcaatgtgtattctacag

Basic information

species Selaginella moellendorffii
transcript EFJ07270
intron # 12
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169040600|gb|FE449731.1|FE449731
EST:     TGTTCTCGATGGTTCATAAATTCAATCACGTTTCCAGGGATGGTCCGAAG                         GTTTTTGTGAGCGAGTATGCAGTTGTCAAGAGCGACGCAGGACAGGGAAGC
genomic: TGTTCTCGATGGTTCATAAATTCAATCACGTTTCCAGGGATGGTCCGAAGgtatcagatg ... tattctacagGTTTTTGTGAGCGAGTATGCAGTTGTCAAGAGCGACGCAGGACAGGGAAGC
EST: gi|169042285|gb|FE453366.1|FE453366
EST:     TGTTCTCGATGGTTCATAAATTCAATCACGTTTCCAGGGATGGTCCGAAG                         GTTTTTGTGAGCGAGTATGCAGTTGTCAAGAGCGACGCAGGACAGGG
genomic: TGTTCTCGATGGTTCATAAATTCAATCACGTTTCCAGGGATGGTCCGAAGgtatcagatg ... tattctacagGTTTTTGTGAGCGAGTATGCAGTTGTCAAGAGCGACGCAGGACAGGG