1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TGCCGCTCGTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTATCAGgtactcataaattcgatacaatggtgttggaatcactcttttgtttcccag
species | Selaginella moellendorffii |
transcript | EFJ15233 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: GTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTTTCAG GTTCCTTTCTTAGAAGACCCCAACACCGGCGTGGAGATGTTTGAAAGCTCGEST: gi|169042434|gb|FE453437.1|FE453437
genomic: GTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTATCAGgtactcataa ... tgtttcccagGTTCCTTTCTTAGAAGACCCCAACACCGGTGTGGAGATGTTTGAAAGCTCG
EST: GTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTTTCAG GTTCCTTTCTTAGAAGACCCCAACACCGGCGTGGAGATGTTTGAAAGCTCGEST: gi|169065620|gb|FE474327.1|FE474327
genomic: GTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTATCAGgtactcataa ... tgtttcccagGTTCCTTTCTTAGAAGACCCCAACACCGGTGTGGAGATGTTTGAAAGCTCG
EST: GTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTTTCAG GTTCCTTTCTTAGAAGACCCCAACACCGGCGTGGAGATGTTTGAAAGCTCGEST: gi|169062994|gb|FE471100.1|FE471100
genomic: GTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTATCAGgtactcataa ... tgtttcccagGTTCCTTTCTTAGAAGACCCCAACACCGGTGTGGAGATGTTTGAAAGCTCG
EST: GTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTTTCAG GTTCCTTTCTTAGAAGACCCCAACACCGGCGTGGAGATGTTTGAAAGCTCGEST: gi|169045906|gb|FE453920.1|FE453920
genomic: GTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTATCAGgtactcataa ... tgtttcccagGTTCCTTTCTTAGAAGACCCCAACACCGGTGTGGAGATGTTTGAAAGCTCG
EST: GTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTTTCAG GTTCCTTTCTTAGAAGACCCCAACACCGGCGTGGAGATGTTTGAAAGCTCGEST: gi|169049163|gb|FE457151.1|FE457151
genomic: GTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTATCAGgtactcataa ... tgtttcccagGTTCCTTTCTTAGAAGACCCCAACACCGGTGTGGAGATGTTTGAAAGCTCG
EST: GTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTATCAG GTTCCTTTCTTAGAAGACCCCAACACCGGTGTGGAGATGTTTGAAAGCTCG
genomic: GTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTATCAGgtactcataa ... tgtttcccagGTTCCTTTCTTAGAAGACCCCAACACCGGTGTGGAGATGTTTGAAAGCTCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCCGCTCGTGGAAGTCCCAAACGAAATTATCTCTTGGAACGGACTGGAATTTATCAGgtactcataaattcgatacaatggtgttggaatcactcttttgtttcccag
- - - - TGGAAG