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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTTCGAAGCTGGCCCCAACACATTTATTCTGTACCCACCATTATATCTGCCGCTGAGATACAATGCAGTACCGGCGGAAAAACTCCTTTCTTACTCGAGgtaactactggtgttgtttgaagagcgtaagctgatccagtgaggatgaag

Basic information

species Selaginella moellendorffii
transcript EFJ24868
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169097542|gb|FE497984.1|FE497984
EST:     CCGCTGAGATACAATGCAGTACCGGCGGAAAAACTCCTTTCTTACTCGAG                         GCGCTTGCGATTCTTTACCTTTCTCAGAGGCAGCTTGAAAACGTGCTGAAC
genomic: CCGCTGAGATACAATGCAGTACCGGCGGAAAAACTCCTTTCTTACTCGAGgtaactactg ... gaggatgaagGCGCTTGCGATTCTTTACCTTTCTCAGAGGCAGCTTGAAAACGTGCTGAAC
EST: gi|169114156|gb|FE516835.1|FE516835
EST:     CCGCTGAGATACAATGCAGTACCGGCGGAAAAACTCCTTTCTTACTCGAG                         GCGCTTGCGATTCTTTACCTTTCTCAGAGGCAGCTTGAAAACGTGCTGAAC
genomic: CCGCTGAGATACAATGCAGTACCGGCGGAAAAACTCCTTTCTTACTCGAGgtaactactg ... gaggatgaagGCGCTTGCGATTCTTTACCTTTCTCAGAGGCAGCTTGAAAACGTGCTGAAC
EST: gi|169020470|gb|FE431717.1|FE431717
EST:     CCGCTGAGATACAATGCAGTACCGGCGGAAAAACTCCTTTCTTACTCGAG                         GCGCTTGCGATTCTTTACCTTTCTCAGAGGCAGCTTGAAAACGTGCTGAAC
genomic: CCGCTGAGATACAATGCAGTACCGGCGGAAAAACTCCTTTCTTACTCGAGgtaactactg ... gaggatgaagGCGCTTGCGATTCTTTACCTTTCTCAGAGGCAGCTTGAAAACGTGCTGAAC
EST: gi|169097119|gb|FE500083.1|FE500083
EST:     CCGCTGAGATACAATGCAGTACCGGCGGAAAAACTCCTTTCTTACTCGAG                         GCGCTTGCGATTCTTTACCTTTCTCAGAGGCAGCTTGAAAACGTGCTGAAC
genomic: CCGCTGAGATACAATGCAGTACCGGCGGAAAAACTCCTTTCTTACTCGAGgtaactactg ... gaggatgaagGCGCTTGCGATTCTTTACCTTTCTCAGAGGCAGCTTGAAAACGTGCTGAAC