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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GACAAATTATCGCACACAAGTCGAAGCAGACATTCGTCCTTTCAGAGGATTATTGCTTGGACTGTTTTTTGTAACGACGGGCACATCGATCGATCTCCAGgtgaggacagagcattgtttttgaccgatttttatactgttctatccattttgcag

Basic information

species Selaginella moellendorffii
transcript EFJ10924
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169023428|gb|FE431898.1|FE431898
EST:     TATTGCTTGGACTGTTTTTTGTAACGACGGGCACATCGATCGATCTCCAG                         CTTTTAATTCGAGAGTGGCCAAATGTTTTAGCACTCCTAGGTGGCTTAATC
genomic: TATTGCTTGGACTGTTTTTTGTAACGACGGGCACATCGATCGATCTCCAGgtgaggacag ... cattttgcagCTTTTAATTCGAGAGTGGCCAAATGTTTTAGCACTCCTAGGTGGCTTAATC
EST: gi|169093395|gb|FE492699.1|FE492699
EST:     TATTGCTTGGACTGTTTTTTGTAACGACGGGCACATCGATCGATCTCCAG                         CTTTTAATTCGAGAGTGGCCAAATGTTTTAGCACT
genomic: TATTGCTTGGACTGTTTTTTGTAACGACGGGCACATCGATCGATCTCCAGgtgaggacag ... cattttgcagCTTTTAATTCGAGAGTGGCCAAATGTTTTAGCACT
EST: gi|169080478|gb|FE488455.1|FE488455
EST:     TATTGCTTGGACTGTTTTTTGTAACGACGGGCACATCGATCGATCTCCAG                         CTTTTAATTCGAGAGTGGCCAAATGTTTTAGCACTCCTAGGTGGCTTAATC
genomic: TATTGCTTGGACTGTTTTTTGTAACGACGGGCACATCGATCGATCTCCAGgtgaggacag ... cattttgcagCTTTTAATTCGAGAGTGGCCAAATGTTTTAGCACTCCTAGGTGGCTTAATC