Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCCATCGAGCTCATCCGCCGTGCCGTGGAGTCGGGGATCACCTTCCTCGACACCGCCGACTGCTACGGCCCCTTCGCCAACGAAATCCTCGTCGGCAAGgtgagatttctcgcatgcctctggaaatttcgaggttttccttccaagaacacaccccgctctcgcatgtttcccccaagaactcatcgattctcttccag

Basic information

species Selaginella moellendorffii
transcript EFJ26109
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169071669|gb|FE477098.1|FE477098
EST:     ACACCGCCGACTGCTACGGCCCCTTCGCCAACGAAATCCTCGTCGGCAAG                         GCAATCCGAGGGATCCGCGACAGGGTCCAGATCGCCACGAAATTCGCGGTG
genomic: ACACCGCCGACTGCTACGGCCCCTTCGCCAACGAAATCCTCGTCGGCAAGgtgagatttc ... tctcttccagGCAATCCGAGGGATCCGCGACAGGGTCCAGATCGCCACGAAATTCGCGGTG
EST: gi|169074922|gb|FE482777.1|FE482777
EST:     ACACCGCCGACTGCTACGGCCCCTTCGCCAACGAAATCCTCGTCGGCAAG                         GCAATCCGAGGGATCCGCGACAGGGTCCAGATCGCCACGAAATTCGCGGTG
genomic: ACACCGCCGACTGCTACGGCCCCTTCGCCAACGAAATCCTCGTCGGCAAGgtgagatttc ... tctcttccagGCAATCCGAGGGATCCGCGACAGGGTCCAGATCGCCACGAAATTCGCGGTG
EST: gi|169042468|gb|FE453666.1|FE453666
EST:     ACACCGCCGACTGCTACGGCCCCTTCGCCAACGAAATCCTCGTCGGCAAG                         GCAATCCGAGGGATCCGCGACAGGGTCCAGATCGCCACGAAATTCGCGGTG
genomic: ACACCGCCGACTGCTACGGCCCCTTCGCCAACGAAATCCTCGTCGGCAAGgtgagatttc ... tctcttccagGCAATCCGAGGGATCCGCGACAGGGTCCAGATCGCCACGAAATTCGCGGTG