1 5' 3' |
TCTACGTCGGCCACTCGGTCTCGGGCATGATCGGCTGCCTGGCCGCCGCTGCTCGCCCCGAAATCTTCTCCAAGATCATCCTTCTCTCGGCCTCTCCCAGgtaagaaatccagtttactttcgattatacgcatagatctctcgcgatagattacgcatagatctctgtctctctctctgagctctcacagagctctctc...
species | Selaginella moellendorffii |
transcript | EFJ26039 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCTCGCCCCGAAATCTTCTCCAAGATCATCCTTCTCTCGGCCTCTCCCAG GTACTTGAACGATGAGAATTACTTCGGAGGCTTCGAGCAGCAGGATCTCAA
genomic: GCTCGCCCCGAAATCTTCTCCAAGATCATCCTTCTCTCGGCCTCTCCCAGgtaagaaatc ... ctttctccagGTACTTGAACGATGAGAATTACTTCGGAGGCTTCGAGCAGCAGGATCTCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTACGTCGGCCACTCGGTCTCGGGCATGATCGGCTGCCTGGCCGCCGCTGCTCGCCCCGAAATCTTCTCCAAGATCATCCTTCTCTCGGCCTCTCCCAGgtaagaaatccagtttactttcgattatacgcatagatctctcgcgatagattacgcatagatctctgtctctctctctgagctctcacagagctctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttacttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - atctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tctgtct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tctctct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gctctct