1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATGGTGTTCGTGTCGGTGGAGGCAAGGCCACGAATTCACATTCCACTGACCACGgtacgcatcattcgttccacacccgagaaaatacctcctttttctgtgttctccag
species | Selaginella moellendorffii |
transcript | EFJ26017 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TGTTCGTGTCGGTGGAGGCAAGGCCACGAATTCACATTCCACTGACCACG CACAGATTTGCTGCTCACAAATCCGAGGGCGCGGGCGAGACCTCTGATTCCEST: gi|169019893|gb|FE428436.1|FE428436
genomic: TGTTCGTGTCGGTGGAGGCAAGGCCACGAATTCACATTCCACTGACCACGgtacgcatca ... tgttctccagCACAGATTTGCTGCTCACAAATCCGAGGGCGCGGGCGAGACCTCTGATTCC
EST: AATTCACATTCCACTGACCACG CACAGATTTGCTGCTCACAAATCCGAGGGCGCGGGCGAGACCTCTGATTCC
genomic: AATTCACATTCCACTGACCACGgtacgcatca ... tgttctccagCACAGATTTGCTGCTCACAAATCCGAGGGCGCGGGCGAGACCTCTGATTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGGTGTTCGTGTCGGTGGAGGCAAGGCCACGAATTCACATTCCACTGACCACGgtacgcatcattcgttccacacccgagaaaatacctcctttttctgtgttctccag
- - - - - - - GGTGGA
- - - - - - - GTGGAG
- - - - - - - - TGGAGG