Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCCCGGTGCTGCATTCTCCAATGGAAGCAGGGTCAGCATGTCCGCAGAGTGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaaacttccaagagatctagtttctcatagcttacaagtgagagcgctttgtccttccag

Basic information

species Selaginella moellendorffii
transcript EFJ15021
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169099025|gb|FE501759.1|FE501759
EST:     ATCAGCCCCTGG                         TGACTTTGGATTCCATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: ATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169049240|gb|FE459516.1|FE459516
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169027125|gb|FE435659.1|FE435659
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169074598|gb|FE481179.1|FE481179
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169039940|gb|FE447615.1|FE447615
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169111613|gb|FE513970.1|FE513970
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169038566|gb|FE448035.1|FE448035
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169101979|gb|FE504994.1|FE504994
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169042914|gb|FE452073.1|FE452073
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169054656|gb|FE461596.1|FE461596
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169061470|gb|FE469569.1|FE469569
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169098824|gb|FE503352.1|FE503352
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169040077|gb|FE447050.1|FE447050
EST:     CAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: CAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169050118|gb|FE460186.1|FE460186
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169051686|gb|FE457919.1|FE457919
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169039138|gb|FE448293.1|FE448293
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169038227|gb|FE443926.1|FE443926
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169046050|gb|FE453128.1|FE453128
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169095651|gb|FE498342.1|FE498342
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169111614|gb|FE513971.1|FE513971
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169039788|gb|FE449450.1|FE449450
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169103480|gb|FE507379.1|FE507379
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169039139|gb|FE448294.1|FE448294
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169059127|gb|FE468272.1|FE468272
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169038226|gb|FE443925.1|FE443925
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169095888|gb|FE499736.1|FE499736
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169074597|gb|FE481178.1|FE481178
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169062770|gb|FE470856.1|FE470856
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169047900|gb|FE455965.1|FE455965
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169088671|gb|FE491531.1|FE491531
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169040104|gb|FE447051.1|FE447051
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169034872|gb|FE442315.1|FE442315
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169039838|gb|FE447524.1|FE447524
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169048819|gb|FE456625.1|FE456625
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169044445|gb|FE451069.1|FE451069
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169066493|gb|FE476250.1|FE476250
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169051251|gb|FE459161.1|FE459161
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169038567|gb|FE448036.1|FE448036
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169034857|gb|FE444046.1|FE444046
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169110878|gb|FE512650.1|FE512650
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169045061|gb|FE450918.1|FE450918
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169039109|gb|FE448797.1|FE448797
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169062023|gb|FE470993.1|FE470993
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169064603|gb|FE471334.1|FE471334
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169059595|gb|FE468829.1|FE468829
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169061860|gb|FE470154.1|FE470154
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169034711|gb|FE445603.1|FE445603
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169088606|gb|FE493897.1|FE493897
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169024210|gb|FE432523.1|FE432523
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169115868|gb|FE517647.1|FE517647
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169043615|gb|FE452683.1|FE452683
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169056756|gb|FE465983.1|FE465983
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169074087|gb|FE483502.1|FE483502
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169055786|gb|FE465365.1|FE465365
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169034568|gb|FE446461.1|FE446461
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169036912|gb|FE446030.1|FE446030
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169055888|gb|FE465102.1|FE465102
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169060155|gb|FE468141.1|FE468141
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169054657|gb|FE461597.1|FE461597
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169065998|gb|FE473782.1|FE473782
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169088672|gb|FE491532.1|FE491532
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169074973|gb|FE482191.1|FE482191
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169058460|gb|FE466357.1|FE466357
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169044426|gb|FE451063.1|FE451063
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169045060|gb|FE450917.1|FE450917
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169058461|gb|FE466358.1|FE466358
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169068772|gb|FE478465.1|FE478465
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169040823|gb|FE447874.1|FE447874
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169043976|gb|FE454370.1|FE454370
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169105983|gb|FE504343.1|FE504343
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169066079|gb|FE473863.1|FE473863
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169046051|gb|FE453129.1|FE453129
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169043616|gb|FE452684.1|FE452684
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169065343|gb|FE473244.1|FE473244
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169047132|gb|FE457213.1|FE457213
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         TGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
EST: gi|169105982|gb|FE504342.1|FE504342
EST:     TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGG                         CGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA
genomic: TGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 363

CTCCCGGTGCTGCATTCTCCAATGGAAGCAGGGTCAGCATGTCCGCAGAGTGGCTCCCAGGACAGCCTCGTCCAGCCTACCTAGACGGATCAGCCCCTGGgtgagtttaa ... gtccttccagTGACTTTGGATTCGATCCACTGGGACTTGGAGAAGTTCCCGACAACCTGGAACGATTCAAGGAGTCAGAGCTCATCCACTGCAGATGGGCAATGCTGGCA




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