1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CGCAATGCCGACGCCAAGATTGTGGACCCGGAGACCGGCGCGTCGCTGCCGCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAGgtacttaatcaatccatttgccatcccggaaacctaaaattcacgtaaatgaaatactcag
species | Selaginella moellendorffii |
transcript | EFJ13708 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAG GCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCTEST: gi|169108888|gb|FE512299.1|FE512299
genomic: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAGgtacttaatc ... aaatactcagGCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCT
EST: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAG GCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCTEST: gi|169043104|gb|FE454018.1|FE454018
genomic: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAGgtacttaatc ... aaatactcagGCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCT
EST: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAG GCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCTEST: gi|169043103|gb|FE454017.1|FE454017
genomic: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAGgtacttaatc ... aaatactcagGCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCT
EST: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAG GCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCTEST: gi|169069209|gb|FE480007.1|FE480007
genomic: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAGgtacttaatc ... aaatactcagGCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCT
EST: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAG GCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCTEST: gi|169096944|gb|FE497074.1|FE497074
genomic: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAGgtacttaatc ... aaatactcagGCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCT
EST: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAG GCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCTEST: gi|169075419|gb|FE483053.1|FE483053
genomic: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAGgtacttaatc ... aaatactcagGCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCT
EST: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAG GCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCT
genomic: GCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAGgtacttaatc ... aaatactcagGCTACCTCGGCGATCCCGAATCCACGCGCTCCACCGTGGACAAGGACGGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCAATGCCGACGCCAAGATTGTGGACCCGGAGACCGGCGCGTCGCTGCCGCGCAACCAGCCGGGGGAGATGTGCATCAGGGGCCCCCAGGTCATGAAAGgtacttaatcaatccatttgccatcccggaaacctaaaattcacgtaaatgaaatactcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG