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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGCGATTTGCGCGGTTGCTATTGGGAGAGGATATGTCTGGCGGTGCCAAGGGAGTTTCCACTGCATTGGCGCTGTCAAATGCCATCACAAATCTCTCTGgttcgttttcgatctagacttgtcatggtacggtgtaaccgtgtgggtcttcgctgttgcag

Basic information

species Selaginella moellendorffii
transcript EFJ07173
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ07173 (Selaginella moellendorffii), 5'ss of exon 1
lower sequence: Vv03s0038g03620.t01 (Vitis vinifera), 5'ss of exon 3
GAGCGATTTGCGCGGTTGCTATTGGGAGAGGATATGTCTGGCGGTGCCAAGGGAGTTTCCACTGCATTGGCGCTGTCAAATGCCATCACAAATCTCTCTGgttcgttttcgatctagacttgtca-tggtacggtgta-accgtgtgggtcttcgctgttgcag------------------------------------
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GAGAGATTTGCTAAGCTTCTACTTGGGGAAGATATGTCTGGAGGAGGGAAAGGGGTTTGTACTGCCCTTGCCATCTCAAACGCCATCACAAATCTCTCTGgttagtttgcagtctctttctgttacttatcctgtgtatggttcctgagaaaatggaggaaaaggaaagaactagatgttttcagtgttgtgtttcctgt