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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGCTTGGTTTCACGTAACATGCCTTTCTGGGATCGCCATCAAGGCCGAGACCACGTCTTTGTTGCCACCCACGACTTCGGGGCATGCTTCCATGCAATGgtacgtttctggatcacggcttgataagttttggctccttcgcatgcatgcatgactctttccaatgtggttttctcatgag

Basic information

species Selaginella moellendorffii
transcript EFJ04250
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ04250 (Selaginella moellendorffii), 5'ss of exon 1
lower sequence: GRMZM2G113245_T01 (Zea mays), 5'ss of exon 1
GGGCTTGGTTTCACGTAACATGCCTTTCTGGGATCGC--CATCAAGGCCGAGACCACGTCTTTGTTGCCACCCACGACTTCGGGGCATGCTTCCATGCAATGgta--cgtttctggatcacggcttgataagtttt---ggctccttcgcatgca-tgcatgactctttccaatgtggttttctcatgag------------
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CGACCTCGTCCAGGCCGGGATGCCGTATTGGAATCGCTCCGCCGGGGCCGA--CCACGTCTTCGTCGCCTCCCACGACTTCGGCGCCTGCTTCCATCCCATGgtgagcgtgtccggcgaaaagctcccgactttttctgggctcagtttgttgcggtgggtggttgcgtcctgcttgcgcacctaaatccattgcgtgtaaa