1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TCCTCCTCCGAATCCGCCACATTCACTTTCTCCAGCCATGCAACAGGGTGTACCAGTAACTAGGGATGGGGTCCGAGATGCACTCAATCGCCTCGTCAAGgtgattatctctttgcattcaatactttcgcctatttaaggtataggtggattttgttgtgaagtgatcgccaatgactgaactgtcacacatggcgtat...
species | Physcomitrella patens |
transcript | PP1S197_88V6.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TACCAGTAACTAGGGATGGGGTCCGAGATGCACTCAATCGCCTCGTCAAG AATGAGCATTTCATAGAGATGGTGTATCGAGAGATGAACACACACAGTTTTEST: gi|67698960|gb|BJ959193.1|BJ959193
genomic: TACCAGTAACTAGGGATGGGGTCCGAGATGCACTCAATCGCCTCGTCAAGgtgattatct ... tgtgatgtagAATGAGCATTTCATAGAGATGGTGTATCGAGAGATGAACACACACAGTTTT
EST: TACCAGTAACTAGGGATGGGGTCCGAGATGCANTCAATCGCCTCGTCAAG AATGAGCATCTCATAGAGATGGTGTATCGAGAGATGAACACACACAGTTTTEST: gi|162169278|gb|FC345440.1|FC345440
genomic: TACCAGTAACTAGGGATGGGGTCCGAGATGCACTCAATCGCCTCGTCAAGgtgattatct ... tgtgatgtagAATGAGCATTTCATAGAGATGGTGTATCGAGAGATGAACACACACAGTTTT
EST: TACCAGTAACTAGGGATGGGGTCCGAGATGCACTCAATCGCCTCGTCAAG AATGAGCATTTCATAGAGATGGTGTATCGAGAGATGAACACACACAGTTTTEST: gi|67726964|gb|BJ977223.1|BJ977223
genomic: TACCAGTAACTAGGGATGGGGTCCGAGATGCACTCAATCGCCTCGTCAAGgtgattatct ... tgtgatgtagAATGAGCATTTCATAGAGATGGTGTATCGAGAGATGAACACACACAGTTTT
EST: TACCAGTAACTAGGGATGGGGTCCGAGATGCACTCAATCGCCTCGTCAAG AATGAGCATTTCATAGAGATGGTGTATCGAGAGATGAACACACACAGTTTTEST: gi|18338017|gb|BJ170041.1|BJ170041
genomic: TACCAGTAACTAGGGATGGGGTCCGAGATGCACTCAATCGCCTCGTCAAGgtgattatct ... tgtgatgtagAATGAGCATTTCATAGAGATGGTGTATCGAGAGATGAACACACACAGTTTT
EST: TACCAGTAACTAGGGATGGGGTCCGAGATGCACTCAATCGCCTCGTCAAG AATGAGCATTTCATAGAGATGGTGTATCGAGAGATGAACACACACAGTTTT
genomic: TACCAGTAACTAGGGATGGGGTCCGAGATGCACTCAATCGCCTCGTCAAGgtgattatct ... tgtgatgtagAATGAGCATTTCATAGAGATGGTGTATCGAGAGATGAACACACACAGTTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCTCCTCCGAATCCGCCACATTCACTTTCTCCAGCCATGCAACAGGGTGTACCAGTAACTAGGGATGGGGTCCGAGATGCACTCAATCGCCTCGTCAAGgtgattatctctttgcattcaatactttcgcctatttaaggtataggtggattttgttgtgaagtgatcgccaatgactgaactgtcacacatggcgtat
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