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GGAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTGgtgattagaccggccaccattgtagttaatgtgatgatgctgtgtgcaggctgtgatggatggtcttcgcacatctattaatagtgtgttagaagcatat...
species | Physcomitrella patens |
transcript | PP1S47_5V6.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGAAGCCATTCTTCTG GCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATGEST: gi|208363383|gb|DC946981.1|DC946981
genomic: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTGgtgattagac ... tggagtgcagGCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATG
EST: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTG GCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATGEST: gi|208385887|gb|DC956725.1|DC956725
genomic: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTGgtgattagac ... tggagtgcagGCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATG
EST: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTG GCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATGEST: gi|208353491|gb|DC922503.1|DC922503
genomic: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTGgtgattagac ... tggagtgcagGCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATG
EST: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTG GCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATGEST: gi|208364937|gb|DC947079.1|DC947079
genomic: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTGgtgattagac ... tggagtgcagGCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATG
EST: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTG GCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATGEST: gi|67696009|gb|BJ956242.1|BJ956242
genomic: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTGgtgattagac ... tggagtgcagGCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATG
EST: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTG GCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATGEST: gi|162248338|gb|FC422553.1|FC422553
genomic: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTGgtgattagac ... tggagtgcagGCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATG
EST: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTG GCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATGEST: gi|37836672|gb|BJ594680.1|BJ594680
genomic: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTGgtgattagac ... tggagtgcagGCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATG
EST: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGAAGCCATTCTTCTG GCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATGEST: gi|37826376|gb|BJ584388.1|BJ584388
genomic: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTGgtgattagac ... tggagtgcagGCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATG
EST: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTG GCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATGEST: gi|162211219|gb|FC386931.1|FC386931
genomic: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTGgtgattagac ... tggagtgcagGCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATG
EST: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATNGGAGCCATTCTTCTG GCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATGEST: gi|208358589|gb|DC946550.1|DC946550
genomic: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTGgtgattagac ... tggagtgcagGCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATG
EST: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTG GCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATG
genomic: GAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTGgtgattagac ... tggagtgcagGCAGGACTGTTCATATACGACATCTTCTGGGTGTTCTTCACGCCTGTAATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAATCGAAATGCTATCGCTGGGGTCGTTCAAGATTGGAGCCATTCTTCTGgtgattagaccggccaccattgtagttaatgtgatgatgctgtgtgcaggctgtgatggatggtcttcgcacatctattaatagtgtgttagaagcatat
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