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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGATTTTAGGCCCATATTGCGCGAGCTCTTATTAACACATCAAGGTCTGGAGTTTCTGCACGATACACCTGAGTTTCAAGATAGATATGgtacgtgattccgtcaaatgataatatgattgcttctgttcagtagtttacaaggttttagatcagttatttgacaaactttttgattttgctcgtagaa...

Basic information

species Physcomitrella patens
transcript PP1S68_31V6.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S68_31V6.1 (Physcomitrella patens), 5'ss of exon 6
lower sequence: AT5G44090.1 (Arabidopsis thaliana), 5'ss of exon 6
GATGATTTTAGGCCCATATTGCGCGAGCTCTTATTAACACATCAAGGTCTGGAGTTTCTGCACGATACACCTGAGTTTCAAGATAGATATGgtacgtgattccgtcaaatgataatatgat-tgcttctgttcagtagtt-tacaaggttttagatcagttattt-gacaaactttttgattttgctcgtagaa
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GCTGACTTCAAACCAGTTCTTGATGAGCTTCTGACAACTCATCCCGGCTTGGAATTCCTGAGGAATACACCTGAGTTTCAAGAAAGATATGgtaag-aacttggtttt-tgatacattgatgttatggtgtgaaatagttctaccagaatgtctgttttctactaagacgttcgtacaatttctttccatata-