1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GAAGGACGGAGCCTTTCACAAGCGCCTCAATCAAAACCATATTCTGACAGTAGAAGACTTTTTGCGGCTGGTAGTCATGGATCCTCAGAGGCTGCGCAATgtaagtacctgaattttacagatttctgattctgttaccggttgtttatgttatcctggttttttaactcctaatgtttaattaactagttttaatttta...
species | Physcomitrella patens |
transcript | PP1S336_7V6.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TAGAAGACTTTTTGCGGCTGGTAGTCATGGATCCTCAGAGGCTGCGCAAT ATTCTAGGAAATGGAATGTCAAACAAGATGTGGGAAGGCACAGTGGAGCACEST: gi|162250495|gb|FC428398.1|FC428398
genomic: TAGAAGACTTTTTGCGGCTGGTAGTCATGGATCCTCAGAGGCTGCGCAATgtaagtacct ... tcgtgtttagATTCTAGGAAATGGAATGTCAAACAAGATGTGGGAAGGCACAGTGGAGCAC
EST: TAGAAGACTTTTTGCGGCTGGTAGTCATGGATCCTCAGAGGCTGCGCAAT ATTCTAGGAAATGGAATGTCAAACAAGATGTGGGAAGGCACAGTGGAGCAC
genomic: TAGAAGACTTTTTGCGGCTGGTAGTCATGGATCCTCAGAGGCTGCGCAATgtaagtacct ... tcgtgtttagATTCTAGGAAATGGAATGTCAAACAAGATGTGGGAAGGCACAGTGGAGCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGGACGGAGCCTTTCACAAGCGCCTCAATCAAAACCATATTCTGACAGTAGAAGACTTTTTGCGGCTGGTAGTCATGGATCCTCAGAGGCTGCGCAATgtaagtacctgaattttacagatttctgattctgttaccggttgtttatgttatcctggttttttaactcctaatgtttaattaactagttttaatttta
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