Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCACGCGAGGTGGGCCATGTTGGGTGCCGCTGGGTTCGTTCTTCCCGAGGCATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcaggggtccggagggcgtggtttagcacggagaagattttgtatggtagagcgtagtgattcattttggtattcgggaatgaatgcagtcttgatgcgggtgcggatgagtgcatgtggtgcgcccggtggcgaacgagaatgtctgacgagttggtgtggttgtcag

Basic information

species Physcomitrella patens
transcript PP1S6_313V6.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208398261|gb|DC916428.1|DC916428
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208353105|gb|DC921849.1|DC921849
EST:     CATTCAACAAGTTCGGCNCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTNGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACN
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208350739|gb|DC918199.1|DC918199
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|37846949|gb|BJ604957.1|BJ604957
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208396788|gb|DC920412.1|DC920412
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208364400|gb|DC950701.1|DC950701
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208373312|gb|DC948586.1|DC948586
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208363096|gb|DC958009.1|DC958009
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162177735|gb|FC354569.1|FC354569
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162190632|gb|FC367518.1|FC367518
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208387587|gb|DC953329.1|DC953329
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208346173|gb|DC917126.1|DC917126
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162267721|gb|FC443711.1|FC443711
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67695186|gb|BJ955419.1|BJ955419
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162262927|gb|FC439294.1|FC439294
EST:     GCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: GCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162189777|gb|FC365311.1|FC365311
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208359540|gb|DC954093.1|DC954093
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67698906|gb|BJ959139.1|BJ959139
EST:     CCGAGGCAGTGTGG-GGGAG                         ACCGGAGCTTTGCTGCTGGA-GGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208374900|gb|DC956173.1|DC956173
EST:     CATCCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208377519|gb|DC922622.1|DC922622
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162272756|gb|FC448772.1|FC448772
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162246281|gb|FC423639.1|FC423639
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162235096|gb|FC411218.1|FC411218
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208359085|gb|DC957833.1|DC957833
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208354430|gb|DC926607.1|DC926607
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162271868|gb|FC448078.1|FC448078
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208352854|gb|DC917818.1|DC917818
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162270763|gb|FC446376.1|FC446376
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208361987|gb|DC950464.1|DC950464
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162232039|gb|FC409113.1|FC409113
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208361902|gb|DC953952.1|DC953952
EST:     TTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: TTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162157873|gb|FC334144.1|FC334144
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162267720|gb|FC443710.1|FC443710
EST:     GGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGTTGCTGGAGGGTGACTCCATCAAGTATTTTGGAGCCACC
genomic: GGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162254233|gb|FC429952.1|FC429952
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162270764|gb|FC446377.1|FC446377
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162271665|gb|FC448590.1|FC448590
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162263794|gb|FC439659.1|FC439659
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208349260|gb|DC918010.1|DC918010
EST:     TTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: TTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|37823465|gb|BJ581531.1|BJ581531
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208378928|gb|DC922774.1|DC922774
EST:     CGCTGTGTGC-GGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208370173|gb|DC944398.1|DC944398
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162170792|gb|FC347406.1|FC347406
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208345802|gb|DC917679.1|DC917679
EST:     CATTCGACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208350525|gb|DC926230.1|DC926230
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208375205|gb|DC945355.1|DC945355
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208382499|gb|DC923169.1|DC923169
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162157872|gb|FC334143.1|FC334143
EST:     GGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTGGGAGCCACC
genomic: GGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162233002|gb|FC408409.1|FC408409
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208345945|gb|DC921102.1|DC921102
EST:     TCGGCGCTGTGTGCNGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCATC
genomic: TCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208347850|gb|DC921149.1|DC921149
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208380767|gb|DC919455.1|DC919455
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208396742|gb|DC920394.1|DC920394
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208397222|gb|DC920865.1|DC920865
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67724421|gb|BJ974680.1|BJ974680
EST:     CGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208396073|gb|DC924539.1|DC924539
EST:     TTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: TTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208376856|gb|DC918769.1|DC918769
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCGTCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162155526|gb|FC331503.1|FC331503
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208395409|gb|DC919971.1|DC919971
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67693515|gb|BJ953748.1|BJ953748
EST:     TGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: TGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162231613|gb|FC408232.1|FC408232
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208354345|gb|DC926564.1|DC926564
EST:     CGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67698599|gb|BJ958832.1|BJ958832
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162167321|gb|FC342309.1|FC342309
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162173975|gb|FC349775.1|FC349775
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208381665|gb|DC915531.1|DC915531
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208399673|gb|DC920891.1|DC920891
EST:     CANTCAACAAGTTCGGCGCTGTGTGCNGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTNGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162264278|gb|FC441380.1|FC441380
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162215973|gb|FC393430.1|FC393430
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208347876|gb|DC921161.1|DC921161
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208370222|gb|DC952044.1|DC952044
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162157170|gb|FC333740.1|FC333740
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208365192|gb|DC946793.1|DC946793
EST:     GGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: GGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162233003|gb|FC408410.1|FC408410
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208374684|gb|DC948656.1|DC948656
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208357339|gb|DC953719.1|DC953719
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208400530|gb|DC925280.1|DC925280
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67698409|gb|BJ958642.1|BJ958642
EST:     ATTCAACAAGTTTNGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: ATTCAACAAG-TTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208397378|gb|DC916332.1|DC916332
EST:     TGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTNGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: TGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208346104|gb|DC917057.1|DC917057
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208366912|gb|DC951399.1|DC951399
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208349521|gb|DC921967.1|DC921967
EST:     TCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: TCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162201064|gb|FC378195.1|FC378195
EST:     GCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: GCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208399681|gb|DC920899.1|DC920899
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67727304|gb|BJ977563.1|BJ977563
EST:     CCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208393873|gb|DC946111.1|DC946111
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162234779|gb|FC409265.1|FC409265
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTTGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162239463|gb|FC417954.1|FC417954
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162198350|gb|FC372637.1|FC372637
EST:     CGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208389352|gb|DC953190.1|DC953190
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208373657|gb|DC952482.1|DC952482
EST:     GCTGTGTGCGGNCCCGAGGCAGTGTGG-GGAAG                         ACCGGAGC-TTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: GCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162194119|gb|FC369462.1|FC369462
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162271664|gb|FC448589.1|FC448589
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162260658|gb|FC436662.1|FC436662
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162213412|gb|FC389089.1|FC389089
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208348724|gb|DC926399.1|DC926399
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGATGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162242464|gb|FC414920.1|FC414920
EST:     GGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: GGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67697520|gb|BJ957753.1|BJ957753
EST:     GTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTANTTCGGAGCCACC
genomic: GTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208380204|gb|DC927483.1|DC927483
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67694681|gb|BJ954914.1|BJ954914
EST:     AGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: AGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162196802|gb|FC374702.1|FC374702
EST:     GCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: GCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|37852846|gb|BJ610854.1|BJ610854
EST:     TTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: TTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|67697427|gb|BJ957660.1|BJ957660
EST:     GCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGAACTCCATCAAGTACTTCGGAGCCAC
genomic: GCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTG-ACTCCATCAAGTACTTCGGAGCCAC
EST: gi|162279983|gb|FC456169.1|FC456169
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208395105|gb|DC920518.1|DC920518
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGCGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162183725|gb|FC359108.1|FC359108
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208375844|gb|DC926936.1|DC926936
EST:     AGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: AGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|162198351|gb|FC372638.1|FC372638
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208377525|gb|DC922628.1|DC922628
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208355034|gb|DC926699.1|DC926699
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
EST: gi|208382594|gb|DC919790.1|DC919790
EST:     CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAG                         ACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC
genomic: CATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 281

CCACGCGAGGTGGGCCATGTTGGGTGCCGCTGGGTTCGTTCTTCCCGAGGCATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcagg ... tggttgtcagACCGGAGCTTTGCTGCTGGAGGGTGACTCCATCAAGTACTTCGGAGCCACCGTCCCCCTCAATCTGGCAGCGGCCGTGATCGCCGAGGTGATTCTGGTAG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCACGCGAGGTGGGCCATGTTGGGTGCCGCTGGGTTCGTTCTTCCCGAGGCATTCAACAAGTTCGGCGCTGTGTGCGGGCCCGAGGCAGTGTGGTGGAAGgtgaggcaggggtccggagggcgtggtttagcacggagaagattttgtatggtagagcgtagtgattcattttggtattcgggaatgaatgcagtcttgatgcgggtgcggatgagtgcatgtggtgcgcccggtggcgaacgagaatgtctgacgagttggtgtggttgtcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG