1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATCTATGTTGTTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAGgtatcaagtgattttctgcttctggtttattatcctgttaagtgtttgagcgtaacagaaaccaattattggtcgtttcactttttagttttcaatgcag...
species | Physcomitrella patens |
transcript | PP1S47_298V6.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAG CAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCAEST: gi|162208431|gb|FC384186.1|FC384186
genomic: TTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAGgtatcaagtg ... tgtgatgcagCAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCA
EST: TTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAG CAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCAEST: gi|67575986|gb|BJ948810.1|BJ948810
genomic: TTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAGgtatcaagtg ... tgtgatgcagCAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCA
EST: TTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAG CAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCA
genomic: TTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAGgtatcaagtg ... tgtgatgcagCAAATCATAAATGATCCACTGATGAGGAATAGTGCAATTCTTGTATTTGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCTATGTTGTTGATTCATGTGATAGAGAACGAATTGGCAAGGCAGCGACTGAATTTCAGgtatcaagtgattttctgcttctggtttattatcctgttaagtgtttgagcgtaacagaaaccaattattggtcgtttcactttttagttttcaatgcag
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