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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATGGATTGGCAACCAAGGTCGAGAAGTCGAGGAAGCAGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttcattcgttggaattattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctgcattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccag

Basic information

species Physcomitrella patens
transcript PP1S450_9V6.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S450_9V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: LOC_Os02g13530.1 (Oryza sativa), 5'ss of exon 3
AATGGATTGGCAACCAAGGTCGAGAAGTCGAGGAAGCAGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttcattcgttggaattattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctg-cattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccag
|||||  | || |||||||| ||||||||  | |||||||| |||||| | |||||| || | ||||||||| | ||||||||||||||   | |  | |     ||         | ||||| |||||   | ||   | |  |   |    ||||  ||||  |    ||   || || ||  || |  | ||   |                                                           
AATGGCCTCGCCACCAAGGTTGAGAAGTCTCGCAAGCAGATGAAGGAGAGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtctatat--acttacctgaccg------ccaagttctattattataagagttataaaccgc-attgcta-actacatgtaactaaactgcttgcttgtgtcgattttgcag-----------------------------------------------------------

upper sequence: PP1S450_9V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: LOC_Os06g36160.1 (Oryza sativa), 5'ss of exon 3
AATGGATTGGCAACCAAGGTCGAGAAGTCGAGGAAGCAGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttcattcgttggaattattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctgcattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccag
|||||  | || || ||||| ||||||||  | |||||||| ||||| || |||||| || | ||||||||| | ||||||||||||||  ||    | |   |  |   |   |  | ||  || ||| ||| |     || || || |  |  || |   |   |  ||  ||   ||      |    || | |  | |||      ||  |||  |                                     
AATGGTCTTGCCACTAAGGTAGAGAAGTCACGTAAGCAGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtaccaagta--tcaacccagcattttgagc-at-ttatgttaacaatattgcaatagt--atttaggtagcttcaactt--cagtcttcagtgcgtgacctaacttcgtgttatctgctaattttgtag------------------------------------

upper sequence: PP1S450_9V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: GRMZM2G091383_T01 (Zea mays), 5'ss of exon 3
AATGGATTGGCAACCAAGGTCGAGAAGTCGAGGAAGCAGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttcattcgttggaattattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctgcattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccag
|| ||  | || |||||||| ||||||||| | |||||||| |||||| | |||||| |  ||||||||||| | ||||||||||||||  |    | | | ||    | | |||  |   | ||||||       |  |||  | |   |    | |  |       |||    || ||        |   |  || |   ||| || || |   | |  | |  | | |   |   ||  |||||          
AACGGTCTTGCTACCAAGGTGGAGAAGTCGCGCAAGCAGATGAAGGAGAGGAAGAACAGGGCGAAGAAGATCCGCGGTGTGAAGAAGgtatgcgcacttgcattcatctgactgttgtgtctaatatta---ctgcgcatttggaatgtggggatttcattgt-----gtttctgtggttctgataaaaaaatagttat---tttttgcgtgtaactgc--taatttttttgttggattggttttgcag--------

upper sequence: PP1S450_9V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: GRMZM2G029685_T01 (Zea mays), 5'ss of exon 3
AATGGATTGGCAACCAAGGTCGAGAAGTCGAGGAAGCAGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttcattcgttggaattattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctgcattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccag
|| ||  | || |||||||| ||||||||  | |||||||| ||||| || |||||| |  ||||||| ||| | ||||||||||||||  ||   || ||   ||||||  |   |  | |   |||    |      |||  ||||     ||| | | |      |                                                                                        
AACGGCCTTGCTACCAAGGTAGAGAAGTCACGAAAGCAGATGAAGGAACGTAAGAACAGGGCGAAGAAAATCCGTGGTGTGAAGAAGgtgagtac-cagtca--ggaattgctactcgtattcccattgttctggtacatttcaattatgtttgctgcacaattttttgcag-------------------------------------------------------------------------------------

upper sequence: PP1S450_9V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: AT5G28060.1 (Arabidopsis thaliana), 5'ss of exon 4
AATGGATTGGCAACCAAGGTCGAGAAGTCGAGGAAGCAGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttcattcgttggaattattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctgcattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccag
|||||| | |  |||||| | ||||| || ||||| |||||||||||| | |||||| |  ||||||||||| | ||||| ||||||||  |            |  |  |            | | |||    |  |||     || ||   | || | |    | |  | |  ||| ||  |    |||   |||||   ||| ||||| |                                            
AATGGACTTGACACCAAGATTGAGAAATCAAGGAAACAGATCAAGGAGAGGAAGAACAGGGCGAAGAAGATCCGTGGTGTTAAGAAGgtaaga-----------gagacca------------acactaaccagaaatctacat-ttgctattgttatgttt---gtgcctgttttgtcttaacg-atatttgcattgt---tttgtgagtgtag------------------------------------------

upper sequence: PP1S450_9V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: Vv14s0030g01620.t01 (Vitis vinifera), 5'ss of exon 4
AATGGATTGGCAACCAAGGTCGAGAAGTCGAGGAAGCAGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgtt-----cgttttcattcgt--tggaattattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctgcattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccag
||||||||||  ||||||||||||||||| |||||||| || |||||| | |||||  | || |||||| || | ||||| ||||||||       |  |  ||| |   ||| |   || ||     ||  | | | |||    ||    ||| |  |      |||| | |                                                                                           
AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGAAGAATAGGTCCAAGAAGGTCCGAGGTGTAAAGAAGgtaagaagtgaataaatttgcagtggtacctttttctctcatttaactca-ttctcacctccctatttcccatttcttgctaacag-------------------------------------------------------------------------------------------

upper sequence: PP1S450_9V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: EFJ29464 (Selaginella moellendorffii), 5'ss of exon 4
AATGGATTGGCAACCAAGGTCGAGAAGTCGAGGAAGCAGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttcattcgttggaattattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctgcattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccag
|| ||| | ||||||| ||   ||||||||||||||||| |||||||| | |||||| |  | ||||||||| | || |||||||||||  | ||||  || |     |   | ||   | | || |   | |    |  |  |||| | |                                                                                                          
AACGGACTTGCAACCAGGGAGCAGAAGTCGAGGAAGCAGCTCAAGGAGAGGAAGAACAGGGCCAAGAAGATCCGCGGAGTGAAGAAGgtctgctttctctc-tctctctctctctctccattgatgt---gcttgcttgctcccatt-cag----------------------------------------------------------------------------------------------------------

upper sequence: PP1S450_9V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: EFJ28032 (Selaginella moellendorffii), 5'ss of exon 4
AATGGATTGGCAACCAAGGTCGAGAAGTCGAGGAAGCAGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttcattcgttggaattattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctgcattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccag
|| ||| | ||||||| ||   ||||||||||||||||| |||||||| | |||||| |  | ||||||||| | || |||||||||||  | | ||  ||  |     | |    ||   |    | | || |  |  |  ||   | | |                                                                                                         
AACGGACTTGCAACCAGGGAGCAGAAGTCGAGGAAGCAGCTCAAGGAGAGGAAGAACAGGGCCAAGAAGATCCGCGGAGTGAAGAAGgtctgctctctctctctctctctctctctctctctccattgatgtgcttgcttgctc-ccattcag--------------------------------------------------------------------------------------------------------

upper sequence: PP1S450_9V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: EFJ07954 (Selaginella moellendorffii), 5'ss of exon 4
AATGGATTGGCAACCAAGGTCGAGAAGTCGAGGAAGCAGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttcattcgttgga-attattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctgcattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccag
|| ||| | || ||||  |   | || |||||||||||| |||||||||| |||||| || ||||||||||| | || ||||||||||| ||| ||  ||  |     || | ||| ||   ||  ||   |||    |  | |||                                                                                                                
AACGGACTTGCCACCAGAGAGCAAAAATCGAGGAAGCAGCTCAAGGAGCGGAAGAACAGAGCGAAGAAGATCCGCGGAGTGAAGAAGgtccgtctttttttctaatccatgagtgtgctctctttgatcg-gtttgcttgctctcag---------------------------------------------------------------------------------------------------------------

upper sequence: PP1S450_9V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: EFJ16004 (Selaginella moellendorffii), 5'ss of exon 4
AATGGATTGGCAACCAAGGTCGAGAAGTCGAGGAAGCAGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttcattcgttggaattattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctgcattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccag
|| ||| | || ||||  |   | || |||||||||||| |||||||||| |||||| || ||||||||||| | || ||||||||||| ||| ||  ||  |   |||   ||   | || | | ||   |   ||| |  |   |                                                                                                              
AACGGACTTGCCACCAGAGAGCAAAAATCGAGGAAGCAGCTCAAGGAGCGGAAGAACAGAGCGAAGAAGATCCGCGGAGTGAAGAAGgtccgtctttttttct---aatccatgag-tgagctctctttgatc--ggtttgcttgctctcag---------------------------------------------------------------------------------------------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162261085|gb|FC436946.1|FC436946
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37849254|gb|BJ607262.1|BJ607262
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67720325|gb|BJ970584.1|BJ970584
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162209966|gb|FC385796.1|FC385796
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37831964|gb|BJ589976.1|BJ589976
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67716746|gb|BJ967006.1|BJ967006
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67712576|gb|BJ966025.1|BJ966025
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162213390|gb|FC389067.1|FC389067
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162270208|gb|FC446284.1|FC446284
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|18349465|gb|BJ181514.1|BJ181514
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67716643|gb|BJ966903.1|BJ966903
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67569245|gb|BJ942069.1|BJ942069
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162274827|gb|FC451062.1|FC451062
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162271310|gb|FC446181.1|FC446181
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67725267|gb|BJ975526.1|BJ975526
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67570999|gb|BJ943823.1|BJ943823
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67575355|gb|BJ948179.1|BJ948179
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162209967|gb|FC385797.1|FC385797
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162241306|gb|FC416937.1|FC416937
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67578392|gb|BJ950559.1|BJ950559
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|208383593|gb|DC903550.1|DC903550
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|18343862|gb|BJ175900.1|BJ175900
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCC
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCC
EST: gi|67725655|gb|BJ975914.1|BJ975914
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67701284|gb|BJ961517.1|BJ961517
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37848314|gb|BJ606322.1|BJ606322
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67697255|gb|BJ957488.1|BJ957488
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37846534|gb|BJ604542.1|BJ604542
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67694304|gb|BJ954537.1|BJ954537
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67573584|gb|BJ946408.1|BJ946408
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162215279|gb|FC391047.1|FC391047
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67723967|gb|BJ974226.1|BJ974226
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|18342708|gb|BJ174743.1|BJ174743
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37827706|gb|BJ585718.1|BJ585718
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162274939|gb|FC450590.1|FC450590
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162247232|gb|FC423056.1|FC423056
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37850471|gb|BJ608479.1|BJ608479
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|18338963|gb|BJ170989.1|BJ170989
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162227897|gb|FC403705.1|FC403705
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67721592|gb|BJ971851.1|BJ971851
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67717133|gb|BJ967392.1|BJ967392
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67692501|gb|BJ952734.1|BJ952734
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67696970|gb|BJ957203.1|BJ957203
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37827711|gb|BJ585723.1|BJ585723
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162221852|gb|FC398419.1|FC398419
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67696722|gb|BJ956955.1|BJ956955
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37834640|gb|BJ592652.1|BJ592652
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37848979|gb|BJ606987.1|BJ606987
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162261084|gb|FC436945.1|FC436945
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162204520|gb|FC380812.1|FC380812
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162220281|gb|FC396312.1|FC396312
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37836124|gb|BJ594132.1|BJ594132
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162213391|gb|FC389068.1|FC389068
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67726252|gb|BJ976511.1|BJ976511
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37842061|gb|BJ600069.1|BJ600069
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67573337|gb|BJ946161.1|BJ946161
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37821854|gb|BJ579920.1|BJ579920
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|18348414|gb|BJ180462.1|BJ180462
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162258722|gb|FC434521.1|FC434521
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|7648112|gb|AW739095.1|AW739095
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|7583808|gb|AW699712.1|AW699712
EST:     GCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: GCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37850481|gb|BJ608489.1|BJ608489
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162274826|gb|FC451061.1|FC451061
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37828417|gb|BJ586429.1|BJ586429
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67718904|gb|BJ969163.1|BJ969163
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|15728272|gb|BI740704.1|BI740704
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162227898|gb|FC403706.1|FC403706
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67709889|gb|BJ965705.1|BJ965705
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67727254|gb|BJ977513.1|BJ977513
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67573867|gb|BJ946691.1|BJ946691
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67717745|gb|BJ968004.1|BJ968004
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162220280|gb|FC396311.1|FC396311
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|15327418|gb|BI488097.1|BI488097
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67724286|gb|BJ974545.1|BJ974545
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162246684|gb|FC425277.1|FC425277
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37851888|gb|BJ609896.1|BJ609896
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|162269282|gb|FC444786.1|FC444786
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37852783|gb|BJ610791.1|BJ610791
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|67725163|gb|BJ975422.1|BJ975422
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
EST: gi|37823053|gb|BJ581119.1|BJ581119
EST:     AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAG                         ACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA
genomic: AGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 174

AATGGATTGGCAACCAAGGTCGAGAAGTCGAGGAAGCAGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttc ... ttggtcccagACAAAGGCCGCCGGGGACGCCAAGAAGAAGAAGTAAGCTTGACATTAAGAAATTGCCAAATATTGCGGCGAAGAATGAATCTATTACTGGAGGTCCAGAT




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AATGGATTGGCAACCAAGGTCGAGAAGTCGAGGAAGCAGATCAAGGAGCGCAAGAACCGATCGAAGAAGATCAGGGGTGTGAAGAAGgttcgttttcattcgttggaattattgtcctaagttatattaagttcaggtcttttcattactgaagctacgctaccggaggttatcatgttttctcctgcattcttattgtgcgtttatgagtatgtttacaatgaagtgtctcacgacctgcatttgcttggtcccag

- - - - - - - - - - - - - - - - - -  AGATCA
- - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - -  GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG