1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TCGTGCAGAGGCCACTGACGTGGCGAACGCAGTTCTCGATGGAACCGATGCTGTGATGCTTAGTGGAGAGACTGCAAATGGATCTTACCCTGAACTCGCTgtaattacctcttacgctgcgtatgtttttgatccaaaacaaacacccagtcatctgaatatggaaagtctgtgtaggattgtgcacatattaactatat...
species | Physcomitrella patens |
transcript | PP1S392_18V6.3 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CTGTGATGCTTAGTGGAGAGACTGCAAATGGATTTTACCCTGAACTCGCT GTGGCAGTGATGTCCCAGATCTGCCAGGAGGCTGAGGCTGCGCTGGATTATEST: gi|162276812|gb|FC452494.1|FC452494
genomic: CTGTGATGCTTAGTGGAGAGACTGCAAATGGATCTTACCCTGAACTCGCTgtaattacct ... ctttacgtagGTGGCAGTGATGTCCCAGATCTGCCAGGAGGCTGAGGCTGCGCTGGATTAT
EST: CTGTGATGCTTAGTGGAGAGACTGCAAATGGATCTTACCCTGAACTCGCT GTGGCAGTGATGTCCCAGATCTGCCAGGAGGCTGAGGCTGCGCTGGATTAT
genomic: CTGTGATGCTTAGTGGAGAGACTGCAAATGGATCTTACCCTGAACTCGCTgtaattacct ... ctttacgtagGTGGCAGTGATGTCCCAGATCTGCCAGGAGGCTGAGGCTGCGCTGGATTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCGTGCAGAGGCCACTGACGTGGCGAACGCAGTTCTCGATGGAACCGATGCTGTGATGCTTAGTGGAGAGACTGCAAATGGATCTTACCCTGAACTCGCTgtaattacctcttacgctgcgtatgtttttgatccaaaacaaacacccagtcatctgaatatggaaagtctgtgtaggattgtgcacatattaactatat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA