Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccgcagatatattcctgtcgcacttgcatacactatcaagtgtgttacctggttgtaaaaataaatcgaagttatgttcctactactgtgtactttgtagtctattgttgaatctattttagtatgccctctcttctagaggagttcttatttccgattgttttctccag

Basic information

species Physcomitrella patens
transcript PP1S38_194V6.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162163788|gb|FC339828.1|FC339828
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162203304|gb|FC379583.1|FC379583
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18341630|gb|BJ173665.1|BJ173665
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162275355|gb|FC451539.1|FC451539
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|37829954|gb|BJ587966.1|BJ587966
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162203305|gb|FC379584.1|FC379584
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18338593|gb|BJ170617.1|BJ170617
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|37828754|gb|BJ586766.1|BJ586766
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162180494|gb|FC356136.1|FC356136
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162272442|gb|FC449068.1|FC449068
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162233566|gb|FC410948.1|FC410948
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|67725986|gb|BJ976245.1|BJ976245
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162201159|gb|FC377666.1|FC377666
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162267482|gb|FC444233.1|FC444233
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162203574|gb|FC379060.1|FC379060
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162249702|gb|FC426816.1|FC426816
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162208795|gb|FC384931.1|FC384931
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTTTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|67577870|gb|BJ950037.1|BJ950037
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162219345|gb|FC395341.1|FC395341
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162272443|gb|FC449069.1|FC449069
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|208397902|gb|DC916657.1|DC916657
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|37848584|gb|BJ606592.1|BJ606592
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162258650|gb|FC434345.1|FC434345
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|67578018|gb|BJ950185.1|BJ950185
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18358480|gb|BJ190539.1|BJ190539
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAA-GTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162265552|gb|FC441567.1|FC441567
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162266614|gb|FC441987.1|FC441987
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18361783|gb|BJ193850.1|BJ193850
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162207153|gb|FC382475.1|FC382475
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|67700739|gb|BJ960972.1|BJ960972
EST:     TTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: TTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162180495|gb|FC356137.1|FC356137
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|67578208|gb|BJ950375.1|BJ950375
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|100436063|gb|BY979361.1|BY979361
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162276836|gb|FC452518.1|FC452518
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162277226|gb|FC453656.1|FC453656
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|7207455|gb|AW561456.1|AW561456
EST:     AACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTC-GCCCCAATCTGAAGACAAGGGTGTCCC
genomic: AACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTG-CCCAATTTGGAGACAAGGGTGTCCC
EST: gi|18359386|gb|BJ191447.1|BJ191447
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAAGGGTGTCCC
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAA-GGGTGTCCC
EST: gi|67569136|gb|BJ941960.1|BJ941960
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162277227|gb|FC453657.1|FC453657
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|67725217|gb|BJ975476.1|BJ975476
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162267481|gb|FC444232.1|FC444232
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162258810|gb|FC434817.1|FC434817
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18329502|gb|BJ161508.1|BJ161508
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCANTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTC
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTC
EST: gi|37829797|gb|BJ587809.1|BJ587809
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|67571902|gb|BJ944726.1|BJ944726
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18344088|gb|BJ176127.1|BJ176127
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|37845158|gb|BJ603166.1|BJ603166
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162272521|gb|FC448511.1|FC448511
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18337126|gb|BJ169150.1|BJ169150
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18329501|gb|BJ161507.1|BJ161507
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACA
EST: gi|162258809|gb|FC434816.1|FC434816
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|37824738|gb|BJ582804.1|BJ582804
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162163787|gb|FC339827.1|FC339827
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18327151|gb|BJ159152.1|BJ159152
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162201547|gb|FC377429.1|FC377429
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18372500|gb|BJ204102.1|BJ204102
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18335428|gb|BJ167447.1|BJ167447
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162261991|gb|FC436824.1|FC436824
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18328914|gb|BJ160920.1|BJ160920
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGA
EST: gi|37823281|gb|BJ581347.1|BJ581347
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162276835|gb|FC452517.1|FC452517
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|208377280|gb|DC902761.1|DC902761
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|19787796|gb|BQ040673.1|BQ040673
EST:     CTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAA-TTGNGAGACAAGGGTGTCCC
genomic: CTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTG-GAGACAAGGGTGTCCC
EST: gi|37821619|gb|BJ579685.1|BJ579685
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162235887|gb|FC411630.1|FC411630
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|67695269|gb|BJ955502.1|BJ955502
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162264651|gb|FC441649.1|FC441649
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162207152|gb|FC382474.1|FC382474
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162201548|gb|FC377430.1|FC377430
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162261992|gb|FC436825.1|FC436825
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18330727|gb|BJ162733.1|BJ162733
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18342475|gb|BJ174510.1|BJ174510
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|37851975|gb|BJ609983.1|BJ609983
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18350628|gb|BJ182679.1|BJ182679
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162274060|gb|FC450132.1|FC450132
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162219346|gb|FC395342.1|FC395342
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18345618|gb|BJ177661.1|BJ177661
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18374816|gb|BJ206394.1|BJ206394
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|37841563|gb|BJ599571.1|BJ599571
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162217323|gb|FC392063.1|FC392063
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|67716696|gb|BJ966956.1|BJ966956
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18364145|gb|BJ196218.1|BJ196218
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|18332276|gb|BJ164289.1|BJ164289
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162201160|gb|FC377667.1|FC377667
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|19786886|gb|BQ040554.1|BQ040554
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162264650|gb|FC441648.1|FC441648
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162208796|gb|FC384932.1|FC384932
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162203573|gb|FC379059.1|FC379059
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|37852795|gb|BJ610803.1|BJ610803
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162233565|gb|FC410947.1|FC410947
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162203095|gb|FC380167.1|FC380167
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|67698416|gb|BJ958649.1|BJ958649
EST:     CAAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: C-AACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162235886|gb|FC411629.1|FC411629
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|37837929|gb|BJ595937.1|BJ595937
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGC-AAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|7148112|gb|AW510034.1|AW510034
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTTCTGCCCAATTTGGAGACAAGGGTGTCCC
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGG-TCTGCCCAATTTGGAGACAAGGGTGTCCC
EST: gi|162266613|gb|FC441986.1|FC441986
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|162272508|gb|FC448510.1|FC448510
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
EST: gi|67701075|gb|BJ961308.1|BJ961308
EST:     ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG                         TACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA
genomic: ACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 32 (upstream exon), 35 (downstream exon)
Score: 123

ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccg ... ttttctccagTACAAGCTGTGCAAAGTCAGGTCTGCCCAATTTGGAGACAAGGGTGTCCCACACATCACTACCTTCGATGGCCGCACCATCAG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAGgtacaatccgcagatatattcctgtcgcacttgcatacactatcaagtgtgttacctggttgtaaaaataaatcgaagttatgttcctactactgtgtactttgtagtctattgttgaatctattttagtatgccctctcttctagaggagttcttatttccgattgttttctccag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAGG