Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCGTGCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttcacaatgttataattttttgattactgtgagcgattttgagaagtcatctactagtaagtcctaacatcacgagtagaatactagttatttg...

Basic information

species Physcomitrella patens
transcript PP1S29_222V6.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S29_222V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: LOC_Os07g41750.1 (Oryza sativa), 5'ss of exon 4
GGCGTGCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacattt-cacaatgttataattttttgattactgtgagcgattttgagaagtcatctactagtaagtcctaacatcacgagtagaatactagttatttg
||||||||| || ||||| |||||| | |||||||| ||||| ||||||||||||||||  |    |||    | |  | | || ||    |  |     |     | | || || |  |  |   |    |       ||               
GGCGTGCTATGGTGTGCTCAGGTTTGTTATGGAGAGTGGTGCTAAGGGCTGTGAGgtactctcatgcaaaacgaaagctgtatggttttgcttggattcctgctctatttatgtattgatttgctgttctttggtttacag---------------

upper sequence: PP1S29_222V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: GRMZM2G093902_T02 (Zea mays), 5'ss of exon 4
GGCGTGCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttcacaatgttataattttttgattactgtgagcgattttgagaagtcatctacta---gtaagtcctaacatcacgagtagaatactagttatttg-
||| || || || || || |||||| |||||||||| ||||| ||||||||||||||      | |    ||   | || |  |  | ||  |      || |||  || |     |   | ||   |||   | |  ||     |  |  ||  ||  
GGCATGTTATGGTGTTCTCAGGTTTGTCATGGAGAGTGGTGCTAAGGGCTGTGAGgtgtgagccccc---ttcccaattgtaaaccaatgcaaatttaatt-agagctcgttcgtgatatggaatctctatatttataagccc--ttttgttttcttag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|37833126|gb|BJ591138.1|BJ591138
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162259901|gb|FC436036.1|FC436036
EST:     GTTACGGAGTGCTGAGGTTTTTCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTTTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|100378962|gb|BY986505.1|BY986505
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|67709528|gb|BJ965344.1|BJ965344
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCCATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|67717578|gb|BJ967837.1|BJ967837
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162276013|gb|FC452289.1|FC452289
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162238647|gb|FC418191.1|FC418191
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162227653|gb|FC402334.1|FC402334
EST:     GTTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTTTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|37848305|gb|BJ606313.1|BJ606313
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18342128|gb|BJ174163.1|BJ174163
EST:     TACGGAAGTGCTGAGGTTTATCATTGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCG
genomic: TACGGA-GTGCTGAGGTTTATCAT-GGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCG
EST: gi|67726093|gb|BJ976352.1|BJ976352
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162259362|gb|FC436227.1|FC436227
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|37821206|gb|BJ579272.1|BJ579272
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|37839877|gb|BJ597885.1|BJ597885
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18356425|gb|BJ188484.1|BJ188484
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|22132378|gb|BQ827121.1|BQ827121
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18343666|gb|BJ175704.1|BJ175704
EST:     CTACGGAAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAA
genomic: CTACGGA-GTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAA-GTTGCGTGCCGCTAGGGCCAAGTCTATGAA
EST: gi|162254376|gb|FC430511.1|FC430511
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18361069|gb|BJ193133.1|BJ193133
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18335223|gb|BJ167241.1|BJ167241
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162226892|gb|FC403080.1|FC403080
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|37831992|gb|BJ590004.1|BJ590004
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|37838960|gb|BJ596968.1|BJ596968
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|37845113|gb|BJ603121.1|BJ603121
EST:     GCTACGGAGTGNTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162259569|gb|FC435496.1|FC435496
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|208363095|gb|DC958008.1|DC958008
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18335112|gb|BJ167130.1|BJ167130
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|67726844|gb|BJ977103.1|BJ977103
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18338462|gb|BJ170486.1|BJ170486
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18332762|gb|BJ164775.1|BJ164775
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18330673|gb|BJ162679.1|BJ162679
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTA
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTA
EST: gi|208362665|gb|DC939533.1|DC939533
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162251398|gb|FC427689.1|FC427689
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18352298|gb|BJ184352.1|BJ184352
EST:     CTACGGAAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: CTACGGA-GTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162231531|gb|FC407981.1|FC407981
EST:     GTTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTTTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162231532|gb|FC407982.1|FC407982
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18342319|gb|BJ174354.1|BJ174354
EST:     CTACGGAGTGCTGAGGTTTATCATTGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATT
genomic: CTACGGAGTGCTGAGGTTTATCAT-GGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGG-AAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATT
EST: gi|18367767|gb|BJ199850.1|BJ199850
EST:     GCTACGGAGTGCTGAGGTTTATCATGGANAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18350622|gb|BJ182673.1|BJ182673
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|19790485|gb|BQ041896.1|BQ041896
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162254375|gb|FC430510.1|FC430510
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18372240|gb|BJ203842.1|BJ203842
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGA
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGA
EST: gi|37821439|gb|BJ579505.1|BJ579505
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|22492461|gb|BU052384.1|BU052384
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|67723068|gb|BJ973327.1|BJ973327
EST:     GNTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162222971|gb|FC399927.1|FC399927
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|7047187|gb|AW477081.1|AW477081
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|67720681|gb|BJ970940.1|BJ970940
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162259363|gb|FC436228.1|FC436228
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162217178|gb|FC392542.1|FC392542
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162247018|gb|FC422192.1|FC422192
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|15261455|gb|BI436765.1|BI436765
EST:     AGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: AGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162259902|gb|FC436037.1|FC436037
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|67718049|gb|BJ968308.1|BJ968308
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCCGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|37831026|gb|BJ589038.1|BJ589038
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|67726548|gb|BJ976807.1|BJ976807
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCCGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162274783|gb|FC450524.1|FC450524
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18341762|gb|BJ173797.1|BJ173797
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18329334|gb|BJ161340.1|BJ161340
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162228868|gb|FC405012.1|FC405012
EST:     GTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|7287029|gb|AW599516.1|AW599516
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162222970|gb|FC399926.1|FC399926
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162238646|gb|FC418190.1|FC418190
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162226891|gb|FC403079.1|FC403079
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162264071|gb|FC439925.1|FC439925
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|100361910|gb|BY947688.1|BY947688
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162274782|gb|FC450523.1|FC450523
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|67724505|gb|BJ974764.1|BJ974764
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|37829948|gb|BJ587960.1|BJ587960
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|37833361|gb|BJ591373.1|BJ591373
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162227667|gb|FC402335.1|FC402335
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162272710|gb|FC448336.1|FC448336
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162206864|gb|FC382726.1|FC382726
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162268227|gb|FC443905.1|FC443905
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162264070|gb|FC439924.1|FC439924
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162259568|gb|FC435495.1|FC435495
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|37820999|gb|BJ579065.1|BJ579065
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162228867|gb|FC405011.1|FC405011
EST:     GTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18340063|gb|BJ172091.1|BJ172091
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|67718357|gb|BJ968616.1|BJ968616
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|15727507|gb|BI740326.1|BI740326
EST:     TGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: TGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|67719120|gb|BJ969379.1|BJ969379
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162247019|gb|FC422193.1|FC422193
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18332424|gb|BJ164437.1|BJ164437
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|67704567|gb|BJ964800.1|BJ964800
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|67727433|gb|BJ977692.1|BJ977692
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|37822861|gb|BJ580927.1|BJ580927
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|19788536|gb|BQ040786.1|BQ040786
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAAATC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162268228|gb|FC443906.1|FC443906
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|162206865|gb|FC382727.1|FC382727
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|67712794|gb|BJ966243.1|BJ966243
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
EST: gi|18334395|gb|BJ166412.1|BJ166412
EST:     GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAG                         GTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC
genomic: GCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 166

GGCGTGCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttca ... gggtttacagGTCATTGTCAGTGGAAAGTTGCGTGCCGCTAGGGCCAAGTCTATGAAATTCAAGGATGGCTACATGATCTCATCCGGAAGCCCCGTCAATGATTATATTG




<











<


<









Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGCGTGCTACGGAGTGCTGAGGTTTATCATGGAGAGCGGTGCCAAGGGCTGTGAGgtacatttcacaatgttataattttttgattactgtgagcgattttgagaagtcatctactagtaagtcctaacatcacgagtagaatactagttatttg

- - - - - - - - - - - - -  CATGGA
- - - - - - - - - - - - - -  TGGAGA