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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGAGCATTATCAACTCTTCCGAACCTTGTTTCCACCTTTCCAGAAGTATATTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatctgaccatcactgctgcttattttatttgaaactagagattgatttgttccattaatatgttttatgatgagtacttggtctacggttccgtctgaagtaagtaatgtttcatgaagcgtaatgtttttgtgacaactacacacgatattgacactttgttcacccag

Basic information

species Physcomitrella patens
transcript PP1S108_171V6.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S108_171V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: Vv12s0059g00270.t01 (Vitis vinifera), 5'ss of exon 4
CGAGCATTATCAACTCTTCCGAACCTTGTTTCCACCTTTCCAGAAGTATATTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgt-------actcatctgaccatcactgctgct-tattttatttgaaactagagattgatttgttccattaatatgttttatgatgagtacttggtctacggttccgtctgaagtaagtaatgtttcatgaagcgtaatgtttttgtgacaactacacacgatattgacactttgttcacccag
 |||||   ||   | ||| |     | || ||||| || ||||||||||||||||| || ||||||||||| || || ||||| || ||| | || |||||       | |||||  |    | |  ||| |  |   | ||  || | |   | | |    |     | ||                                                                                                               
GGAGCACATTCCCTTGTTCAGGCTTCTCTTCCCACCATTTCAGAAGTATATTACCAAAGGATATGTTTCAGAAGAGGAAGCTGGGAAAAGACTTGCACAGgtgaattaaaatcatcccaaagactccactgatacacccttttgcaatccaccaactaaaccatgtttctgattcag-----------------------------------------------------------------------------------------------------------

upper sequence: PP1S108_171V6.1 (Physcomitrella patens), 5'ss of exon 4
lower sequence: Vv19s0014g03160.t01 (Vitis vinifera), 5'ss of exon 4
CGAGCATTATCAACTCTTCCGAACCTTGTTTCCACCTTTCCAGAAGTATATTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatctgacca-tcactgctgcttatt--ttatttgaaactagagattgatttgttccattaatatgttttatgatgagtacttggtctacggttccgtctgaagtaagtaatgtttcatgaagcgtaatgtttttgtgacaactacacacgatattgacactttgttcacccag
 ||||||  ||   | ||| |     | || || || ||||||||||  ||||||||||||||||| || ||||||||  |||| || ||| | || ||||||        |  | | ||   |  ||| |  ||  | ||    || |    ||   ||  |||  |  | ||||||||                                                                                                   
GGAGCATATTCCCTTGTTCAGGCTTCTTTTCCCTCCATTCCAGAAGTTCATTACCAAGGGCTATGTCTCCGAGGAAGAATCTGGAAAAAGACTTGCACAGgtaagagaaaaaggacttaccctttgttaataattgatcgagggaagggggc-ataaatttgattgtt--ggtttatgatatag-----------------------------------------------------------------------------------------------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208345610|gb|DC916786.1|DC916786
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162168830|gb|FC345028.1|FC345028
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208354998|gb|DC922156.1|DC922156
EST:     TTACCAAGGGCTATGTNTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208381583|gb|DC915449.1|DC915449
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162268439|gb|FC444312.1|FC444312
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|67727858|gb|BJ978117.1|BJ978117
EST:     TTACCAAGGGNTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTCGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162243478|gb|FC425174.1|FC425174
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|18336793|gb|BJ168816.1|BJ168816
EST:     TACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGNTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGNAC
genomic: TACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208366975|gb|DC951462.1|DC951462
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208400053|gb|DC925265.1|DC925265
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162226798|gb|FC402804.1|FC402804
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAN                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208364730|gb|DC943618.1|DC943618
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208395086|gb|DC920499.1|DC920499
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162159477|gb|FC336266.1|FC336266
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTTTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208379314|gb|DC922914.1|DC922914
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162194331|gb|FC368514.1|FC368514
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208390192|gb|DC949474.1|DC949474
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTNTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208346743|gb|DC917526.1|DC917526
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162219455|gb|FC396946.1|FC396946
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162168831|gb|FC345029.1|FC345029
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208390191|gb|DC949473.1|DC949473
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208350263|gb|DC901619.1|DC901619
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208382695|gb|DC923267.1|DC923267
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162254717|gb|FC431006.1|FC431006
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162249934|gb|FC427035.1|FC427035
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208383460|gb|DC923612.1|DC923612
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162219456|gb|FC396947.1|FC396947
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|208396883|gb|DC924383.1|DC924383
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|18335461|gb|BJ167481.1|BJ167481
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162167961|gb|FC344899.1|FC344899
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162226797|gb|FC402803.1|FC402803
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162196556|gb|FC374846.1|FC374846
EST:     CAAGAGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: CAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|67695905|gb|BJ956138.1|BJ956138
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162187072|gb|FC362854.1|FC362854
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162256142|gb|FC432427.1|FC432427
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
EST: gi|162254718|gb|FC431007.1|FC431007
EST:     TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAG                         GTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC
genomic: TTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatct ... gttcacccagGTTGTGAGTGATCCCACCCTGAACAAGTCTGGTGTATACTGGAGCTGGAAC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CGAGCATTATCAACTCTTCCGAACCTTGTTTCCACCTTTCCAGAAGTATATTACCAAGGGCTATGTTTCAGAGGAAGAGGCTGGCAAGAGATTGGCTCAGgtactcatctgaccatcactgctgcttattttatttgaaactagagattgatttgttccattaatatgttttatgatgagtacttggtctacggttccgtctgaagtaagtaatgtttcatgaagcgtaatgtttttgtgacaactacacacgatattgacactttgttcacccag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAGA