1 5' 3' | 2 5' 3' | 3 5' 3' |
TGAGGCCTACGGAGTACAAGACATCTCGCCTTCACAGGCATAGGAAGACTGTGAACCGGGCTTACGGAGGCACCATGGCTGGTTCTGCAGTGCGCGAGCGgtatgtccagcatttaatttgttttgagaaaggttacatgcacactcatctgtagattgaagttgtctagttaatgtgattagtcttacttcgtattggt...
species | Physcomitrella patens |
transcript | PP1S57_72V6.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTGAACCGGGCTTACGGAGGCACCATGGCTGGTTCTGCAGTGCGCGAGCG CATTATTCGGGCTTTTCTGGTCGAGGAGCAGAAAATTGTAAAGAAGGTCCTEST: gi|67717990|gb|BJ968249.1|BJ968249
genomic: GTGAACCGGGCTTACGGAGGCACCATGGCTGGTTCTGCAGTGCGCGAGCGgtatgtccag ... tatgacgcagCATTATTCGGGCTTTTCTGGTCGAGGAGCAGAAAATTGTAAAGAAGGTCCT
EST: GTGAACCGGGCTTACGGAGGCACCATGGCTGGTTCTGCAGTGCGCGAGCG CATTATTCGGGCTTTTCTGGTCGAGGAGCAGAAAATTGTAAAGAAGGTCCTEST: gi|67726494|gb|BJ976753.1|BJ976753
genomic: GTGAACCGGGCTTACGGAGGCACCATGGCTGGTTCTGCAGTGCGCGAGCGgtatgtccag ... tatgacgcagCATTATTCGGGCTTTTCTGGTCGAGGAGCAGAAAATTGTAAAGAAGGTCCT
EST: GTGAACCGGGCTTACGGAGGCACCATGGCTGGTTCTGCAGTGCGCGAGCG CATTATTCGGGCTTTTCTGGTCGAGGAGCAGAAAATTGTAAAGAAGGTCCTEST: gi|208368973|gb|DC955058.1|DC955058
genomic: GTGAACCGGGCTTACGGAGGCACCATGGCTGGTTCTGCAGTGCGCGAGCGgtatgtccag ... tatgacgcagCATTATTCGGGCTTTTCTGGTCGAGGAGCAGAAAATTGTAAAGAAGGTCCT
EST: GTGAACCGGGCTTACGGAGGCACCATGGCTGGTTCTGCAGTGCGCGAGCG CATTATTCGGGCTTTTCTGGTCGAGGAGCAGAAAATTGTAAAGAAGGTCCTEST: gi|208391121|gb|DC942061.1|DC942061
genomic: GTGAACCGGGCTTACGGAGGCACCATGGCTGGTTCTGCAGTGCGCGAGCGgtatgtccag ... tatgacgcagCATTATTCGGGCTTTTCTGGTCGAGGAGCAGAAAATTGTAAAGAAGGTCCT
EST: GTGAACCGGGCTTACGGAGGCACCATGGCTGGTTCTGCAGTGCGCGAGCG CATTATTCGGGCTTTTCTGGTCGAGGAGCAGAAAATTGTAAAGAAGGTCCT
genomic: GTGAACCGGGCTTACGGAGGCACCATGGCTGGTTCTGCAGTGCGCGAGCGgtatgtccag ... tatgacgcagCATTATTCGGGCTTTTCTGGTCGAGGAGCAGAAAATTGTAAAGAAGGTCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGGCCTACGGAGTACAAGACATCTCGCCTTCACAGGCATAGGAAGACTGTGAACCGGGCTTACGGAGGCACCATGGCTGGTTCTGCAGTGCGCGAGCGgtatgtccagcatttaatttgttttgagaaaggttacatgcacactcatctgtagattgaagttgtctagttaatgtgattagtcttacttcgtattggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG