1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTTATGGAGCAACAATTTCTGCGCCACACATGgttagcttccgttctcagtagcattcaacttggtgcaatctgtgtatcccgtgtatcattttttgctgtgcaggacatgatggtcttcagttttacaaatgattatgaactacatctgacttctgccattctgtctgcag
species | Physcomitrella patens |
transcript | PP1S55_159V6.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTTATGGAGCAACAATTTCTGCGCCACACATG CATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATTEST: gi|162179521|gb|FC356561.1|FC356561
genomic: GTTATGGAGCAACAATTTCTGCGCCACACATGgttagcttcc ... ctgtctgcagCATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATT
EST: GTTATGGAGCAACAATTTCTGCGCCACACATG CATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATTEST: gi|162197970|gb|FC373985.1|FC373985
genomic: GTTATGGAGCAACAATTTCTGCGCCACACATGgttagcttcc ... ctgtctgcagCATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATT
EST: GTTATGGAGCAACAATTTCTGCGCCACACATG CATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATT
genomic: GTTATGGAGCAACAATTTCTGCGCCACACATGgttagcttcc ... ctgtctgcagCATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTATGGAGCAACAATTTCTGCGCCACACATGgttagcttccgttctcagtagcattcaacttggtgcaatctgtgtatcccgtgtatcattttttgctgtgcaggacatgatggtcttcagttttacaaatgattatgaactacatctgacttctgccattctgtctgcag
- - GGAGCA