Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCCCTGACCTACCGTGAGGTGGTAGCCATTGTCATGCAACGTCTGATTTCCATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcactcttggacatttagtttcgtttttctcttatatagtaaatgtgcctatggaaaactctctaggtttagtttgtatgatctacaaaagtttctgaagttggcttttcttgttttgtgataccag

Basic information

species Physcomitrella patens
transcript PP1S38_194V6.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162163788|gb|FC339828.1|FC339828
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162203304|gb|FC379583.1|FC379583
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18341630|gb|BJ173665.1|BJ173665
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|37829954|gb|BJ587966.1|BJ587966
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18331088|gb|BJ163094.1|BJ163094
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162203305|gb|FC379584.1|FC379584
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18338593|gb|BJ170617.1|BJ170617
EST:     ACGGCAAGGTCCGCACTGACAAGTGCTACCNTGCAGGGTTTATGN                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: ACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|37828754|gb|BJ586766.1|BJ586766
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162180494|gb|FC356136.1|FC356136
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162272442|gb|FC449068.1|FC449068
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162233566|gb|FC410948.1|FC410948
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|67725986|gb|BJ976245.1|BJ976245
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162201159|gb|FC377666.1|FC377666
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATNTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162267482|gb|FC444233.1|FC444233
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162203574|gb|FC379060.1|FC379060
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162249702|gb|FC426816.1|FC426816
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162208795|gb|FC384931.1|FC384931
EST:     CATTGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|67577870|gb|BJ950037.1|BJ950037
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162219345|gb|FC395341.1|FC395341
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162272443|gb|FC449069.1|FC449069
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|208397902|gb|DC916657.1|DC916657
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|37848584|gb|BJ606592.1|BJ606592
EST:     CATCGACGGCAAGATCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162258650|gb|FC434345.1|FC434345
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|67578018|gb|BJ950185.1|BJ950185
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18358480|gb|BJ190539.1|BJ190539
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162265552|gb|FC441567.1|FC441567
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162266614|gb|FC441987.1|FC441987
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18361783|gb|BJ193850.1|BJ193850
EST:     CATCGACGGCAAGATCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162207153|gb|FC382475.1|FC382475
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162180495|gb|FC356137.1|FC356137
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|67578208|gb|BJ950375.1|BJ950375
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|100436063|gb|BY979361.1|BY979361
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162276836|gb|FC452518.1|FC452518
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162277226|gb|FC453656.1|FC453656
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18359386|gb|BJ191447.1|BJ191447
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTNATGG                         ATGTGATTTCCATCGCCAAGACAAACGA-AACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|67569136|gb|BJ941960.1|BJ941960
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162277227|gb|FC453657.1|FC453657
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|67725217|gb|BJ975476.1|BJ975476
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162267481|gb|FC444232.1|FC444232
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162258810|gb|FC434817.1|FC434817
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18329502|gb|BJ161508.1|BJ161508
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|37829797|gb|BJ587809.1|BJ587809
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|67571902|gb|BJ944726.1|BJ944726
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18344088|gb|BJ176127.1|BJ176127
EST:     ATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGAC
genomic: ATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTT-ATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGAC
EST: gi|37845158|gb|BJ603166.1|BJ603166
EST:     ATCGACGGCAAGATCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: ATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162272521|gb|FC448511.1|FC448511
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18337126|gb|BJ169150.1|BJ169150
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18329501|gb|BJ161507.1|BJ161507
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162258809|gb|FC434816.1|FC434816
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|37824738|gb|BJ582804.1|BJ582804
EST:     CATNGACGGCAAGGTCCGCACTGACAAGTGCTACCNTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162163787|gb|FC339827.1|FC339827
EST:     CCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18327151|gb|BJ159152.1|BJ159152
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162201547|gb|FC377429.1|FC377429
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18372500|gb|BJ204102.1|BJ204102
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18335428|gb|BJ167447.1|BJ167447
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162261991|gb|FC436824.1|FC436824
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18328914|gb|BJ160920.1|BJ160920
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|37823281|gb|BJ581347.1|BJ581347
EST:     CTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162276835|gb|FC452517.1|FC452517
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|208377280|gb|DC902761.1|DC902761
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|37821619|gb|BJ579685.1|BJ579685
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162235887|gb|FC411630.1|FC411630
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|67695269|gb|BJ955502.1|BJ955502
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162264651|gb|FC441649.1|FC441649
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162207152|gb|FC382474.1|FC382474
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162201548|gb|FC377430.1|FC377430
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162261992|gb|FC436825.1|FC436825
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18330727|gb|BJ162733.1|BJ162733
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18349789|gb|BJ181839.1|BJ181839
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCANGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACG
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACG
EST: gi|18342475|gb|BJ174510.1|BJ174510
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|37851975|gb|BJ609983.1|BJ609983
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18350628|gb|BJ182679.1|BJ182679
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162274060|gb|FC450132.1|FC450132
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162219346|gb|FC395342.1|FC395342
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18345618|gb|BJ177661.1|BJ177661
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18374816|gb|BJ206394.1|BJ206394
EST:     CATCGACGGCAAGATCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|37841563|gb|BJ599571.1|BJ599571
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162217323|gb|FC392063.1|FC392063
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18371782|gb|BJ203384.1|BJ203384
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCANGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|67716696|gb|BJ966956.1|BJ966956
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18364145|gb|BJ196218.1|BJ196218
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|18332276|gb|BJ164289.1|BJ164289
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162201160|gb|FC377667.1|FC377667
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|19786886|gb|BQ040554.1|BQ040554
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162264650|gb|FC441648.1|FC441648
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162208796|gb|FC384932.1|FC384932
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162203573|gb|FC379059.1|FC379059
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|37852795|gb|BJ610803.1|BJ610803
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGA-AACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162233565|gb|FC410947.1|FC410947
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162203095|gb|FC380167.1|FC380167
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|67698416|gb|BJ958649.1|BJ958649
EST:     ATTGGACGGCAAGGTCCGCACTGACAAGTGCTACCNTGCAGGGTTTATGG                         ATGTGATTTCCATCGNCCAAGACAAACGAGAACTTCCGACTGTTGTACGAC
genomic: A-TCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCG-CCAAGACAAACGAGAACTTCCGACTGTTGTACGAC
EST: gi|162235886|gb|FC411629.1|FC411629
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|37837929|gb|BJ595937.1|BJ595937
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|7148112|gb|AW510034.1|AW510034
EST:     TACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: TACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|162272508|gb|FC448510.1|FC448510
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
EST: gi|67701075|gb|BJ961308.1|BJ961308
EST:     CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGG                         ATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA
genomic: CATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 34 (upstream exon), 33 (downstream exon)
Score: 52

GCCCTGACCTACCGTGAGGTGGTAGCCATTGTCATGCAACGTCTGATTTCCATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcac ... gtgataccagATGTGATTTCCATCGCCAAGACAAACGAGAACTTCCGACTGTTGTACGACAACAAGGGTCGTTTTACACTGCACAACATCAGTGCGGAAGAGGCCAAG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GCCCTGACCTACCGTGAGGTGGTAGCCATTGTCATGCAACGTCTGATTTCCATCGACGGCAAGGTCCGCACTGACAAGTGCTACCCTGCAGGGTTTATGGgtgagatcactcttggacatttagtttcgtttttctcttatatagtaaatgtgcctatggaaaactctctaggtttagtttgtatgatctacaaaagtttctgaagttggcttttcttgttttgtgataccag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGCAG