Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GACAAGGCGGTGAAGCGTTTTCTGGTGCGTAACATCGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttctcatggcatggtggaatttggtcctgcctgctaagcatccaagaaaactacgtgaaacattgatatcttctcatcattgggtgacattttaggttttcttacaatgtttgttgctcag

Basic information

species Physcomitrella patens
transcript PP1S270_77V6.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S270_77V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: Vv06s0004g07940.t01 (Vitis vinifera), 5'ss of exon 3
GACAAGGCGGTGAAGCGTTTTCTGGTGCGTAACATCGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttctcatggcatggtggaatttggtcctgcctgctaagcatccaagaaaactacgtgaaacattgatatcttctcatcattgggtgacattttaggttttcttacaatgtttgttgctcag
||||| ||  | ||| | ||||||||| | ||||| |||||||| || || |||||||| |||||||||||||| || || ||  |||  | |    |  ||   |    | |        || ||        | ||  |     |||    ||  ||| ||   |    ||                                       
GACAAAGCTATTAAGAGGTTTCTGGTGAGGAACATTGTGGAGCAAGCTGCTGTTCGTGATGTGCAAGAAGCTTGTGTTTATGATAgtaattcttctttatca--atactttctatcttcttcttctttatggtgatgatgatccactgag---tttgtatttttctacttgtgaag------------------------------------

upper sequence: PP1S270_77V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: EFJ33618 (Selaginella moellendorffii), 5'ss of exon 2
GACAAGGCGGTGAAGCGTTTTCTGGTGCGTAACATCGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttctcatggcatggtggaatttggtcctgcctgctaagcatccaagaaaactacgtgaaacattgatatcttctcatcattgggtgacattttaggttttcttacaatgtttgttgctcag
|||||||| |||||||| || || ||  | ||||||||||||||||| || || || || |||||||| |||||||| |||||  ||| |   ||||     |  |    |   | | ||  || | | ||              |                                                                  
GACAAGGCCGTGAAGCGCTTCCTTGTCAGGAACATCGTGGAGCAGGCAGCGGTGCGCGATGTGCAAGACGCTTGCGTCTACGAATgtaagcagctca--atttttttctctggaggcttgtttgatgaccaatgtcttggttcttgcag---------------------------------------------------------------

upper sequence: PP1S270_77V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: EFJ36971 (Selaginella moellendorffii), 5'ss of exon 2
GACAAGGCGGTGAAGCGTTTTCTGGTGCGTAACATCGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttctcatggcatggtggaatttggtcctgcctgctaagcatccaagaaaactacgtgaaacattgatatcttctcatcattgggtgacattttaggttttcttacaatgtttgttgctcag
|||||||| |||||||| || || ||  | ||||||||||||||||| || || || || |||||||| |||||||| |||||  ||| |   ||||     |  |    |   | | ||  |  | | ||              |                                                                  
GACAAGGCCGTGAAGCGCTTCCTTGTCAGGAACATCGTGGAGCAGGCAGCGGTGCGCGATGTGCAAGACGCTTGCGTCTACGAATgtaagcagctca--atttttttctctggaggcttgtttcatgaccaatgtcttggttcttgcag---------------------------------------------------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162242024|gb|FC418383.1|FC418383
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67709281|gb|BJ965097.1|BJ965097
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162267395|gb|FC443938.1|FC443938
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATTTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67728305|gb|BJ978564.1|BJ978564
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|18344148|gb|BJ176187.1|BJ176187
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67728005|gb|BJ978264.1|BJ978264
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162263289|gb|FC439084.1|FC439084
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67703259|gb|BJ963492.1|BJ963492
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162248323|gb|FC420887.1|FC420887
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162244212|gb|FC420968.1|FC420968
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|18372574|gb|BJ204176.1|BJ204176
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162224993|gb|FC401409.1|FC401409
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162210545|gb|FC386841.1|FC386841
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|37821657|gb|BJ579723.1|BJ579723
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|18337274|gb|BJ169298.1|BJ169298
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162250115|gb|FC427424.1|FC427424
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162228848|gb|FC404693.1|FC404693
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67726418|gb|BJ976677.1|BJ976677
EST:     CGCGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162271190|gb|FC446139.1|FC446139
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|37824897|gb|BJ582963.1|BJ582963
EST:     GTGGAGCCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: GTGGAGC-AGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67725722|gb|BJ975981.1|BJ975981
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162262987|gb|FC440043.1|FC440043
EST:     CGTGGAGCAAGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|7207196|gb|AW561199.1|AW561199
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67726588|gb|BJ976847.1|BJ976847
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162244530|gb|FC422703.1|FC422703
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|37844962|gb|BJ602970.1|BJ602970
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|18345786|gb|BJ177829.1|BJ177829
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|18364735|gb|BJ196808.1|BJ196808
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162278058|gb|FC453877.1|FC453877
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162263288|gb|FC439083.1|FC439083
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGTTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162222851|gb|FC399313.1|FC399313
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162269424|gb|FC445292.1|FC445292
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|19790012|gb|BQ041648.1|BQ041648
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162205127|gb|FC381225.1|FC381225
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|6167142|gb|AW145406.1|AW145406
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|19782009|gb|BQ039799.1|BQ039799
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|37852094|gb|BJ610102.1|BJ610102
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|37836427|gb|BJ594435.1|BJ594435
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATNTNTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|18362157|gb|BJ194225.1|BJ194225
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|18342515|gb|BJ174550.1|BJ174550
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162212991|gb|FC389207.1|FC389207
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67717204|gb|BJ967463.1|BJ967463
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162208207|gb|FC384311.1|FC384311
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162263816|gb|FC438435.1|FC438435
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|19778781|gb|BQ039359.1|BQ039359
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162228849|gb|FC404694.1|FC404694
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162234035|gb|FC410522.1|FC410522
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|18357057|gb|BJ189116.1|BJ189116
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162267396|gb|FC443939.1|FC443939
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|37823342|gb|BJ581408.1|BJ581408
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162271640|gb|FC447525.1|FC447525
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162271189|gb|FC446138.1|FC446138
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGTTAAGATGCAATACTGCATTTTTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162217999|gb|FC393683.1|FC393683
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162278057|gb|FC453876.1|FC453876
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67718096|gb|BJ968355.1|BJ968355
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67723695|gb|BJ973954.1|BJ973954
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162242878|gb|FC415308.1|FC415308
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67719738|gb|BJ969997.1|BJ969997
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162205126|gb|FC381224.1|FC381224
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGTTAAGATGCAATACTGCATTTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162210965|gb|FC387063.1|FC387063
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162202859|gb|FC379841.1|FC379841
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162212110|gb|FC388220.1|FC388220
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162251541|gb|FC425583.1|FC425583
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGTTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162241670|gb|FC418653.1|FC418653
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|37841662|gb|BJ599670.1|BJ599670
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|18329402|gb|BJ161408.1|BJ161408
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|19781256|gb|BQ039674.1|BQ039674
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCCAAGT-ATACGCTAAGATGCAATACTGCATCTCCTGT
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCC-AAGTTATACGCTAAGATGCAATACTGCATCTCTTGT
EST: gi|18346680|gb|BJ178725.1|BJ178725
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67723355|gb|BJ973614.1|BJ973614
EST:     TGGAGCAGGCCGCCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTNCCCAAGTTATACGNTAAGATGCAATACTGCATCTCTTGT
genomic: TGGAGCAGGCCG-CCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTT-CCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGT
EST: gi|162242790|gb|FC415272.1|FC415272
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|18354263|gb|BJ186319.1|BJ186319
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67717913|gb|BJ968172.1|BJ968172
EST:     CGCGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67720047|gb|BJ970306.1|BJ970306
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162234036|gb|FC410523.1|FC410523
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|19782535|gb|BQ039864.1|BQ039864
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|208386641|gb|DC932689.1|DC932689
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|67702821|gb|BJ963054.1|BJ963054
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACATGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162248324|gb|FC420888.1|FC420888
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|162224994|gb|FC401410.1|FC401410
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
EST: gi|7067201|gb|AW497056.1|AW497056
EST:     CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACG                         GGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG
genomic: CGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 34 (upstream exon), 34 (downstream exon)
Score: 52

GACAAGGCGGTGAAGCGTTTTCTGGTGCGTAACATCGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttct ... tgttgctcagGGTACGTGCTTCCCAAGTTATACGCTAAGATGCAATACTGCATCTCTTGTGCCATCCACTCGCACGTGGTGCGTGTGCGATCTCGTGAGGCACGCAGAAT




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GACAAGGCGGTGAAGCGTTTTCTGGTGCGTAACATCGTGGAGCAGGCCGCCGTTCGTGACGTGCAAGAAGCTTGCGTGTACGACGgtaggtttctcatggcatggtggaatttggtcctgcctgctaagcatccaagaaaactacgtgaaacattgatatcttctcatcattgggtgacattttaggttttcttacaatgtttgttgctcag

- - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - -  GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGC