Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAAGGGCAAGCACAGCATCGGTGCCCTTTTCTGGCTTCTGGCGCGCATGGTTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgggagtaagtgcgacagggagtgcggtttgaagttgaatgtgggtgtgggggaagctgtggtgcttgaatgtgatgcctgggggatggggcggggttgcggaggctgaccgtccgcttgtggacggatggtgcag

Basic information

species Physcomitrella patens
transcript PP1S173_16V6.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S173_16V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: AT1G72370.2 (Arabidopsis thaliana), 5'ss of exon 3
CAAGGGCAAGCACAGCATCGGTGCCCTTTTCTGGCTTCTGGCGCGCATGGTTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgggagtaagtgcgacagggagtgcggtttgaagttgaatgtgggtgtgggggaagctgtggtgcttgaatgtgatgcctgggggatggggcggggttgcggaggctgaccgtccgcttgtggacggatggtgcag
|||||| ||||||||||| ||   |||||||||||||||||| |||||||| || |||||||| || || ||    || |  ||    ||||| || ||||||||      | ||         | |      | ||  |   | || ||    |     ||  |    || ||            |     ||||   || |||| | ||                                
CAAGGGAAAGCACAGCATTGGGTGCCTTTTCTGGCTTCTGGCTCGCATGGTCCTTCAGATGCGTGGAACCATTGCTGCTGGACAGAAGTGGGATGTCATGgtaag------aatatcattcttggagctcttagattagaaaggcatctgttcattaaa-aactttccctgtttattgactgaatttttcatatggtatggtgttgtgcag--------------------------------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|67727276|gb|BJ977535.1|BJ977535
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67696384|gb|BJ956617.1|BJ956617
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67578181|gb|BJ950348.1|BJ950348
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAANGACCGC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGC
EST: gi|100385907|gb|BY951101.1|BY951101
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAANGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208372963|gb|DC940594.1|DC940594
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAANGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67724836|gb|BJ975095.1|BJ975095
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208344378|gb|DC912737.1|DC912737
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162210623|gb|FC386311.1|FC386311
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208357109|gb|DC926512.1|DC926512
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162269073|gb|FC444941.1|FC444941
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162205075|gb|FC381784.1|FC381784
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67724783|gb|BJ975042.1|BJ975042
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208374051|gb|DC948920.1|DC948920
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162154106|gb|FC330549.1|FC330549
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGA
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGA
EST: gi|18336422|gb|BJ168444.1|BJ168444
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|19789723|gb|BQ041473.1|BQ041473
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67718769|gb|BJ969028.1|BJ969028
EST:     TTCTGCANATGCNAGGCACAATCANCGCCGCGCACCCATGGNACGTGATG                         GTGGACCTGTTCTTTTAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTAC
EST: gi|162240856|gb|FC415135.1|FC415135
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162210622|gb|FC386310.1|FC386310
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208363687|gb|DC954658.1|DC954658
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|37832820|gb|BJ590832.1|BJ590832
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|18338109|gb|BJ170133.1|BJ170133
EST:     TTCTGCANATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGNACCTGTTCTTTTACAGGGAGNCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208351525|gb|DC905702.1|DC905702
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162271979|gb|FC448397.1|FC448397
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|37848552|gb|BJ606560.1|BJ606560
EST:     TTNTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67716322|gb|BJ966582.1|BJ966582
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGA
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGA
EST: gi|162241012|gb|FC416643.1|FC416643
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|37829707|gb|BJ587719.1|BJ587719
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|100392127|gb|BY953207.1|BY953207
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAANGCNAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162179287|gb|FC356236.1|FC356236
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208383136|gb|DC919583.1|DC919583
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162229589|gb|FC405897.1|FC405897
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162280408|gb|FC456113.1|FC456113
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|37830592|gb|BJ588604.1|BJ588604
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162242696|gb|FC416387.1|FC416387
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208345480|gb|DC913027.1|DC913027
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67717743|gb|BJ968002.1|BJ968002
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGA
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGA
EST: gi|208382331|gb|DC919319.1|DC919319
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67709570|gb|BJ965386.1|BJ965386
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCG
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCG
EST: gi|100408041|gb|BY955880.1|BY955880
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGGGATG                         GTGGACCTGTTCTTTTAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTAC
EST: gi|162274980|gb|FC450631.1|FC450631
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208388172|gb|DC941755.1|DC941755
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTNACAGGGAGCCCGACGA
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGA
EST: gi|162241013|gb|FC416644.1|FC416644
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAA
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAA
EST: gi|162232694|gb|FC408101.1|FC408101
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208380049|gb|DC914599.1|DC914599
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208344868|gb|DC912702.1|DC912702
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAA
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAA
EST: gi|162156689|gb|FC333545.1|FC333545
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGA
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGA
EST: gi|162267030|gb|FC441831.1|FC441831
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162268088|gb|FC443558.1|FC443558
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162240857|gb|FC415136.1|FC415136
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208360894|gb|DC934790.1|DC934790
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208381689|gb|DC928352.1|DC928352
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162154105|gb|FC330548.1|FC330548
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67704705|gb|BJ964938.1|BJ964938
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGAC
EST: gi|100387131|gb|BY951530.1|BY951530
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAANGCNAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162200540|gb|FC376735.1|FC376735
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162267031|gb|FC441832.1|FC441832
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67570498|gb|BJ943322.1|BJ943322
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTT
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTT
EST: gi|162268089|gb|FC443559.1|FC443559
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|37826920|gb|BJ584932.1|BJ584932
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGA-
EST: gi|37852609|gb|BJ610617.1|BJ610617
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67726250|gb|BJ976509.1|BJ976509
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGANGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208394565|gb|DC953604.1|DC953604
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162204913|gb|FC380595.1|FC380595
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67727147|gb|BJ977406.1|BJ977406
EST:     TTNTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208346891|gb|DC905435.1|DC905435
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162205076|gb|FC381785.1|FC381785
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208365513|gb|DC954754.1|DC954754
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67702537|gb|BJ962770.1|BJ962770
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|100391250|gb|BY971562.1|BY971562
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTAC
EST: gi|162207326|gb|FC383363.1|FC383363
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208387978|gb|DC941659.1|DC941659
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGNAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162271980|gb|FC448398.1|FC448398
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162274981|gb|FC450632.1|FC450632
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162253932|gb|FC430605.1|FC430605
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162227891|gb|FC403699.1|FC403699
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|208355209|gb|DC926790.1|DC926790
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162227892|gb|FC403700.1|FC403700
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGA
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGA
EST: gi|18333797|gb|BJ165813.1|BJ165813
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|100360102|gb|BY966026.1|BY966026
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|100395711|gb|BY972128.1|BY972128
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTT
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTT
EST: gi|162179288|gb|FC356237.1|FC356237
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162280409|gb|FC456114.1|FC456114
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162210561|gb|FC386857.1|FC386857
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67573005|gb|BJ945829.1|BJ945829
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162253931|gb|FC430604.1|FC430604
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67724503|gb|BJ974762.1|BJ974762
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACTCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162269074|gb|FC444942.1|FC444942
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162210560|gb|FC386856.1|FC386856
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162254722|gb|FC431011.1|FC431011
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162254721|gb|FC431010.1|FC431010
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162242723|gb|FC416388.1|FC416388
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGA
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGA
EST: gi|67701047|gb|BJ961280.1|BJ961280
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162200539|gb|FC376734.1|FC376734
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67716265|gb|BJ966525.1|BJ966525
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGAC
EST: gi|37825462|gb|BJ583528.1|BJ583528
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|100426810|gb|BY977374.1|BY977374
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGGAC-TGTTCTTTTACAGGGAGCCCGACG
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGG-ACCTGTTCTTTTACAGGGAGCCCGACG
EST: gi|67712793|gb|BJ966242.1|BJ966242
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACTCATGGGACGTGATG                         GTGGACCTGTT
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTT
EST: gi|100356450|gb|BY946371.1|BY946371
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCNAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162229590|gb|FC405898.1|FC405898
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGA
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGA
EST: gi|162252711|gb|FC428748.1|FC428748
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|67704734|gb|BJ964967.1|BJ964967
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAA
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAA
EST: gi|18333611|gb|BJ165626.1|BJ165626
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162264708|gb|FC441706.1|FC441706
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
EST: gi|162156688|gb|FC333544.1|FC333544
EST:     TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATG                         GTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC
genomic: TTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 33

CAAGGGCAAGCACAGCATCGGTGCCCTTTTCTGGCTTCTGGCGCGCATGGTTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgg ... gatggtgcagGTGGACCTGTTCTTTTACAGGGAGCCCGACGAAGGCAAGGACCGCGAGGACGAGGAGGGAGCAGCAGTGGAGTTCGCGGCGGTAGAGTACGCTGCGCCAG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CAAGGGCAAGCACAGCATCGGTGCCCTTTTCTGGCTTCTGGCGCGCATGGTTCTGCAGATGCGAGGCACAATCAGCGCCGCGCACCCATGGGACGTGATGgtaagtgcgggagtaagtgcgacagggagtgcggtttgaagttgaatgtgggtgtgggggaagctgtggtgcttgaatgtgatgcctgggggatggggcggggttgcggaggctgaccgtccgcttgtggacggatggtgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - -  CAGATG