Skip to another splice site:
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctattagactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag

Basic information

species Physcomitrella patens
transcript PP1S127_74V6.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: LOC_Os07g41750.1 (Oryza sativa), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctattagactttgtactaatccgcactattgcttgatcaccttg--attttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
| ||| | ||||||||||||||||||||||| || || |||||||| |||||||| |||||||| || ||||| ||||| ||||| ||||| ||  | |||| |||||  | |      |  |  | |   |  |  |   ||||| |  | || | ||  || |||   |       ||||  ||||      |||  |   ||||                              
TCGAGCTCTACGCCGAGAAGGTGAACAACCGCGGCCTCTGCGCCATCGCCCAGGCCGAGTCGCTCCGCTACAAGCTCCTCGGTGGCCTCGCCGTCAGAAGgt-tgtgctccatcc----tgaaactcgcgttccttaga--tattggtatagcagcatgtcatcttcacagcaaccggctgcttgttcgtg--ccagaattgtgttcga----------------------------

upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: GRMZM2G093902_T02 (Zea mays), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctattagactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
| ||| | ||||| ||||||||||||||||| || || ||||||||||||||||| |||||||| || ||||| || || ||||| || || ||  | |||| |  ||    |||    || |  ||| || |  | ||  | ||  |  || |  |  ||||  || |  |||   |   | |  ||     | |  | |   ||                             
TTGAGCTCTACGCAGAGAAGGTGAACAACCGTGGCCTCTGCGCCATTGCCCAGGCCGAGTCGCTACGCTACAAGCTTCTTGGTGGACTAGCCGTGAGAAGgt-tacgcact-tattccctaca--ttgcacaacactgctatgttaat--atgatgtgcatttctta-gttgttg--tagacttgtagtcactatcacagcaggctcgg--------------------------

upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: GLYMA10G26790.1 (Glycine max), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctattagactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
| ||  | || || || ||||| |||||  ||||||| ||||| ||||| ||||||||||| || |||||||| ||||| ||||| |||||||| ||||||||| |       || | ||||  ||  ||  |||  | | | ||  || |  |  ||| ||   | |||  || |   ||   | | |    |  |||      || |||                        
TCGAACTTTATGCTGAAAAGGTCAACAATAGGGGTCTTTGCGCTATTGCTCAGGCTGAGTCTCTTCGATACAAGCTCCTTGGTGGACTCGCTGTGCGCAGgtgtatattc---attttttag--ttgataaaaatatgtaatctttttttaaaa--ttgtttcattgcga--ttcatgtcgttgtgaaaa---aatgtagaaaattgctgtc-----------------------

upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: GLYMA10G26890.1 (Glycine max), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctattagactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
| ||  | || || || ||||| |||||  ||||||| ||||| ||||| ||||||||||| || || ||||| ||||| ||||| |||||||| ||||||||| |       || | ||||  ||  ||  |||  | | | ||  ||    |  ||| ||   | |||  || |   ||   | | |       | |   | |||  |                         
TTGAACTTTATGCTGAAAAGGTCAACAATAGGGGTCTTTGCGCTATTGCTCAGGCTGAGTCTCTTCGCTACAAGCTCCTTGGTGGACTCGCTGTGCGCAGgtgtatattc---attttttag--ttgataaaaatatgtaatttttttt---taaattgtttcattgcga--ttcatgtcgttgtgaaaaactgtagaaaattgctgtcg-------------------------

upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: GLYMA09G28440.1 (Glycine max), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctattagactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
| ||| | || || |||||||| |||||| | || || || |||||||| ||||| |||||||| || ||||| || || ||||| |||||||||||||||| |         |  | |||     | | ||||| |   ||  |  ||  | |  | |||||   |  |||  |     |  ||    | | ||  |||    |  || || ||||                  
TCGAGCTTTATGCTGAGAAGGTCAACAACAGAGGCCTCTGTGCCATTGCTCAGGCCGAGTCGCTTCGCTACAAGCTTCTCGGTGGCCTCGCTGTTCGCAGgtata--------acatgtta----ctctgctaatgcattcttctagtttgtgatgt-gatttatcattaggcaa-----ggattttaggtttagt-tatta--cgaatttgttgattact--------------

upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: GLYMA16G33240.1 (Glycine max), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctattag-actttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
| ||| | || || |||||||| |||||| | ||  |||| |||||||| ||||| |||||||| || ||||| ||||| || || |||||||||||||||| |          |||  ||   | || |  ||   |   | |    |  |   | ||| || | || ||  ||    |  | ||    ||| |  || |   | |                             
TCGAGCTTTATGCTGAGAAGGTCAACAACAGAGGCTTGTGTGCCATTGCTCAGGCCGAGTCGCTTCGCTACAAGCTCCTCGGCGGCCTCGCTGTTCGCAGgtataacatattactctgctaatgcattcttatatatcaggcaaggattcta--gctttggttat-tatgaattt----gtacattacttgcttaatgtttatgttt-----------------------------

upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: AT2G31610.1 (Arabidopsis thaliana), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctattagactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
| ||| | || || |||||||| |||||| | ||||| || |||||||| ||||||||||| || || ||||| || || |||||||| |||||||||||||  |    |  | |||| ||   |||       |  | | | |  ||  ||  |  |  || |     || |||  || |   | | ||   |  |||| |    |||                          
TTGAGCTCTATGCTGAGAAGGTTAACAACAGAGGTCTCTGTGCCATTGCTCAGGCTGAGTCTCTACGTTACAAGCTTCTCGGTGGTCTTGCTGTTCGCAGgtacgacatt--tctctagtatgtttt-------tgtgtattctctctcaattgctgttgttattgtttagcttacttg-gtcctaatagtgaaatgtatag----gatacaac---------------------

upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: AT3G53870.1 (Arabidopsis thaliana), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctattagactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
| ||| | || ||||||||||| |||||| | ||||| || ||||| || |||||||||||  | || ||||| || || ||||||||||||||||| ||||  |     | | |||  |||    | | |||     |    ||| |||||||  ||  |||   |  ||    ||||    ||  ||    ||  ||    | | || |    ||                  
TTGAGCTTTATGCCGAGAAGGTTAACAACAGAGGTCTCTGTGCCATCGCTCAGGCTGAGTCTTTACGTTACAAGCTTCTTGGTGGTCTCGCTGTTCGTAGgtacga----catttct-ctagttcgtttgctatgttact---ttgtttgatcagtttagtttatcattaga--gactg---atttgga---taggttactagtgt-atataagcat------------------

upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: Vv09s0002g01460.t01 (Vitis vinifera), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct-cgtatctattagactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
||||| | || || ||||| || |||||| | ||||| || |||||||| ||||||||||| || || ||||| || || || || || |||||||||||||| ||  |  ||| || | |    ||   |    | |  | ||  |  |    | ||| | |   || |   || || |   ||     ||| |   |||                                   
TGGAGCTTTATGCTGAGAAAGTTAACAACAGAGGTCTCTGTGCCATTGCTCAGGCTGAGTCACTACGTTACAAGCTTCTTGGAGGGCTTGCTGTTCGCAGgtgggtatcaacgtttccaattttattgtcatattttcataatacagtgt----atcttaaatggttatggaatttacagtttgtagtatgctga-tatatttaa-------------------------------

upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: EDP07493 (Chlamydomonas reinhardtii), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctattagactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
| ||| ||||||| |||||||| | | |||| |||||||||||||| |||||||| ||||||||||| ||||| || |||||||| || || || ||| |||| |   || |     |   |   |||   |     ||  | | |   ||  ||                |||    | |      |||  ||    | ||   |                             
TTGAGCTGTACGCTGAGAAGGTCAGCGACCGTGGTCTGTGCGCCATCGCCCAGGCCGAGTCGCTGCGCTACAAGCTGCTGGGTGGCCTGGCCGTGCGCCGgtgagcagct-gcgaggagagggtgttggggt----tgcggtgtagagggaa-acggcaggaccgcgaagcgttgggggtggcaagggagggcacgaaaccgcatt-----------------------------

upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: EFJ34676 (Selaginella moellendorffii), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctatt--agactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
||||| |||| |||||||||||||||||||| || || |||||||| || || || |||||  |||||||||| |||||||| || || || || || |||| ||    |  | ||| ||   | ||| || || |                                                                                                     
TGGAGCTGTATGCCGAGAAGGTGAACAACCGTGGCCTCTGCGCCATCGCTCAAGCCGAGTCTTTGCGATACAAGCTCCTGGGAGGACTGGCCGTCCGAAGgtttgatttttctttcttttttggccttggtgctcag----------------------------------------------------------------------------------------------------

upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: EFJ31296 (Selaginella moellendorffii), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctatt--agactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
||||| |||| |||||||||||||||||||| || || |||||||| || || || |||||  |||||||||| |||||||| || || || || || |||| ||    |  | ||| ||   | ||| || ||||   |  ||  | |||  |||                                                                                 
TGGAGCTGTATGCCGAGAAGGTGAACAACCGTGGCCTCTGCGCCATCGCTCAAGCCGAGTCTTTGCGATACAAGCTCCTGGGAGGACTGGCCGTCCGAAGgtttgatttttctttcttttttggccttggtgctaaga-gttct-ctacttcgtcag--------------------------------------------------------------------------------

upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: EFJ34304 (Selaginella moellendorffii), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctatt--agactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
||||| |||| |||||||||||||||||||| || || |||||||| || || || |||||  |||||||||| |||||||| || || || || || |||| ||    |  | ||| ||   | ||| || ||||   |  ||  | |||  |||                                                                                 
TGGAGCTGTATGCCGAGAAGGTGAACAACCGTGGCCTCTGCGCCATCGCTCAAGCCGAGTCTTTGCGATACAAGCTCCTGGGAGGACTGGCCGTCCGAAGgtttgatttttctttcttttttggccttggtgctaaga-gttct-ctactttgtcag--------------------------------------------------------------------------------

upper sequence: PP1S127_74V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: EFJ31038 (Selaginella moellendorffii), 5'ss of exon 3
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctatt--agactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag
||||| |||| |||||||||||||||||||| || || |||||||| || || || |||||  |||||||||| |||||||| || || || || || |||| ||    |  | ||| ||   | ||| || ||||    |     | |||  |||                                                                                 
TGGAGCTGTATGCCGAGAAGGTGAACAACCGTGGCCTCTGCGCCATCGCTCAAGCCGAGTCTTTGCGATACAAGCTCCTGGGAGGACTGGCCGTCCGAAGgtttgatttttctttcttttttggccttggtgctaa--gacttctctacttcgtcag--------------------------------------------------------------------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208397377|gb|DC916331.1|DC916331
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208366353|gb|DC947563.1|DC947563
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|162201214|gb|FC378449.1|FC378449
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|18357986|gb|BJ190045.1|BJ190045
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|162269608|gb|FC445567.1|FC445567
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208345907|gb|DC901792.1|DC901792
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|37840022|gb|BJ598030.1|BJ598030
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208390380|gb|DC933425.1|DC933425
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|18362800|gb|BJ194872.1|BJ194872
EST:     AGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: AGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCT-CGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208392807|gb|DC953704.1|DC953704
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|67719364|gb|BJ969623.1|BJ969623
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|67710084|gb|BJ965848.1|BJ965848
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|162250491|gb|FC428394.1|FC428394
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208369055|gb|DC931301.1|DC931301
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208390220|gb|DC949488.1|DC949488
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|100396698|gb|BY953782.1|BY953782
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|37833211|gb|BJ591223.1|BJ591223
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|67726750|gb|BJ977009.1|BJ977009
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|162228424|gb|FC405244.1|FC405244
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208389753|gb|DC938315.1|DC938315
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|67720656|gb|BJ970915.1|BJ970915
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|37822438|gb|BJ580504.1|BJ580504
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|67702161|gb|BJ962394.1|BJ962394
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTG
EST: gi|18375462|gb|BJ207040.1|BJ207040
EST:     AGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: AGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCT-CGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208389554|gb|DC945806.1|DC945806
EST:     GCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: GCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|15729243|gb|BI741216.1|BI741216
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACTGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208359816|gb|DC938921.1|DC938921
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208368268|gb|DC951520.1|DC951520
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|67724111|gb|BJ974370.1|BJ974370
EST:     CAGGNTGAGTCGNTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208360035|gb|DC934924.1|DC934924
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|67716966|gb|BJ967225.1|BJ967225
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208354216|gb|DC902458.1|DC902458
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|18343235|gb|BJ175273.1|BJ175273
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAAGTGCTGAGGTTCATTAATGGAGAGCGGTGCCAAGGGT
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGA-GTGCTGAGGTTCATTA-TGGAGAGCGGTGCCAAGGGT
EST: gi|162250490|gb|FC428393.1|FC428393
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208393922|gb|DC938477.1|DC938477
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|100413536|gb|BY956717.1|BY956717
EST:     AGGCTGAGTCGCTGCGATTACAA-CTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTTGGTACGGAGTGCTGAGGTTCATTATGGAGAGC
genomic: AGGCTGAGTCGCTGCGAT-ACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTT-GTTACGGAGTGCTGAGGTTCATTATGGAGAGC
EST: gi|162269609|gb|FC445568.1|FC445568
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|18327450|gb|BJ159453.1|BJ159453
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208365722|gb|DC935791.1|DC935791
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208347898|gb|DC917605.1|DC917605
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208370047|gb|DC948128.1|DC948128
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|18326387|gb|BJ158386.1|BJ158386
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGNTCATTATGGAGAGCGG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGG
EST: gi|208357230|gb|DC942780.1|DC942780
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|37850730|gb|BJ608738.1|BJ608738
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|67727659|gb|BJ977918.1|BJ977918
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208392206|gb|DC949596.1|DC949596
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|67718572|gb|BJ968831.1|BJ968831
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|162178849|gb|FC354781.1|FC354781
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208394797|gb|DC915618.1|DC915618
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208393333|gb|DC904007.1|DC904007
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208384056|gb|DC919612.1|DC919612
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCCGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208351580|gb|DC905729.1|DC905729
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCCGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|100385509|gb|BY969846.1|BY969846
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208379651|gb|DC903706.1|DC903706
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|67718261|gb|BJ968520.1|BJ968520
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|162201213|gb|FC378448.1|FC378448
EST:     GTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: GTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|18344144|gb|BJ176183.1|BJ176183
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208364553|gb|DC930943.1|DC930943
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208366877|gb|DC951364.1|DC951364
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|162278152|gb|FC454387.1|FC454387
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|18369419|gb|BJ201506.1|BJ201506
EST:     AGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAAAAGCGGTGCCAAGGGTT
genomic: AGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCT-CGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGA-GCGGTGCCAAGGGTT
EST: gi|208371435|gb|DC955771.1|DC955771
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208374394|gb|DC940695.1|DC940695
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208387160|gb|DC945459.1|DC945459
EST:     GCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTT
genomic: GCTGCGATACAAACTCCTGGGTGGTCTCGCTG-TTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTT
EST: gi|18335712|gb|BJ167733.1|BJ167733
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208392633|gb|DC933991.1|DC933991
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|18356278|gb|BJ188337.1|BJ188337
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208368343|gb|DC935684.1|DC935684
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|67727005|gb|BJ977264.1|BJ977264
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTG
EST: gi|208386141|gb|DC949052.1|DC949052
EST:     TGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTTCGCAG                         GGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTT
genomic: TGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTG-TTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTT
EST: gi|18357436|gb|BJ189495.1|BJ189495
EST:     CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAG                         GGCTTGTTACNGAGTGCTGAG
genomic: CAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 48

TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcct ... tgaacgctagGGCTTGTTACGGAGTGCTGAGGTTCATTATGGAGAGCGGTGCCAAGGGTTGTGAG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TGGAGTTGTACGCCGAGAAGGTGAACAACCGGGGTCTGTGCGCCATTGCCCAGGCTGAGTCGCTGCGATACAAACTCCTGGGTGGTCTCGCTGTTCGCAGgtgtgtgcctcgtatctattagactttgtactaatccgcactattgcttgatcaccttgattttctacgaggttaactgcgcgttcagagctcagcgtatcgttctgatgtgctgatcttaaatctgaacgctag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGTT