Skip to another splice site:
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 5'  3'   		2  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgcttgagacaaccttgttttgtctgaattacatatggcgtcattctgttttgatacctgttacacttctctggactgataaaaggttgttgcttgttccag

Basic information

species Physcomitrella patens
transcript PP1S10_385V6.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S10_385V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: LOC_Os11g29190.4 (Oryza sativa), 5'ss of exon 3
TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgcttgagacaaccttgttttgtctgaattacatatggcgtcattctgttttgatacctgttacacttctctggactgataaaaggttgttgcttgttccag
                 |||   || ||||||||||||||||||||||| |||||| | ||||||||  | ||||| || || || || || ||||||||||| ||  | |            | |||  |    | |  |||    ||   | ||   | | |||| |      | ||                             
----------------GGAGAGCGCCTTCAGGAACATCAAGACCATTGCTGAGTGCCTTGCTGACGAGCTTATTAATGCCGCCAAGGGCTCATCCAACAGgtacaacacattgtcatggtacatcttgctttttgttcggatgataccaggttattgacacatctgtgatctaattgtgtttcag-----------------------

upper sequence: PP1S10_385V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: LOC_Os11g29190.2 (Oryza sativa), 5'ss of exon 3
TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgcttgagacaaccttgttttgtctgaattacatatggcgtcattctgttttgatacctgttacacttctctggactgataaaaggttgttgcttgttccag
| || ||||||||  | |||   || ||||||||||||||||||||||| |||||| | ||||||||  | ||||| || || || || || ||||||||||| ||  | |            | |||  |    | |  |||    ||   | ||   | | |||| |      | ||                             
TCACCACTGGTGCCAGGGAGAGCGCCTTCAGGAACATCAAGACCATTGCTGAGTGCCTTGCTGACGAGCTTATTAATGCCGCCAAGGGCTCATCCAACAGgtacaacacattgtcatggtacatcttgctttttgttcggatgataccaggttattgacacatctgtgatctaattgtgtttcag-----------------------

upper sequence: PP1S10_385V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: GRMZM2G078985_T01 (Zea mays), 5'ss of exon 3
TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgcttgagacaaccttgttttgtctgaattacatatggcgtcattctgttttgatacctgttacacttctctggactgataaaaggttgttgcttgttccag
| || ||||||||  | |||   ||||||||||||||||| |||||||| |||||| | || || || || || ||||| || || || |||||||||||||| |                | |  ||||||   || || |||     |  | ||||  || |||  |      | ||  || ||  | ||   || |||||  |||
TCACCACTGGTGCCAGGGAGAGCGCTTTCAGGAACATCAAAACCATTGCTGAGTGCCTTGCAGATGAGTTGATCAACGCTGCCAAGGGCTCTTCCAACAGgtata--------------tatatcctgtctgg-ctatatttggt----tgtttttttcctatctgcgatgtgaat-tgtgctcattcatggcaatt-cttgtcacag

upper sequence: PP1S10_385V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: GLYMA09G15680.2 (Glycine max), 5'ss of exon 3
TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgcttgagacaaccttgttttgtctgaattacatatggcgtcattctgttttgatacctgttacacttctctggactgataaaaggttgttgcttgttccag
| || || ||||| || ||  |||||||||| ||||||||||| ||||| || ||||||||||| ||| | ||||| ||||||||||| || ||||||||||| | |  || | |   |  |   | || || |     | ||  || ||| || |||  |   ||||    ||  ||| | ||| |     ||  ||  | || |||
TAACAACAGGTGCTCGGGAAGCTGCTTTCAGAAACATCAAGACAATTGCTGAATGCTTGGCTGATGAACTTATTAATGCAGCTAAAGGTTCATCCAACAGgtatactttttaacattcctattcatggtgtgtacattttctgatgtaattttgattttttttttgttg-gttttgctgaa-tgaca-----ttactg--tatttcag

upper sequence: PP1S10_385V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: GLYMA13G37610.1 (Glycine max), 5'ss of exon 4
TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgcttgagacaaccttgttttgtctgaattacatatggcgtcattctgttttgatacctgttacacttct---------ctggactga-taaaaggttgttgcttgttccag
| || ||||| || || ||  |||||||||| || || ||||| |||||||| ||||||||||| ||| | ||||| ||||| |||||||| ||||||||||| | | ||  |        | | | |     |     | ||  ||  ||    ||  ||  || | |   ||||          |||  | | | |||  |  |      || |||
TAACAACTGGAGCACGGGAAGCTGCTTTCAGAAATATTAAGACAATTGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAAGGGTCATCCAACAGgtatacttctaaaatt--ttatatgtggaggatacagtttctgatgtattttatcttctatgtctttcatttttctaattggagtttgggttcactgaaaaataatactccatttcag

upper sequence: PP1S10_385V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: GLYMA12G32850.1 (Glycine max), 5'ss of exon 4
TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgcttgagacaacctt-----gttttgtctgaattacat-atggcgtcattctgttttgatacctgttacacttctctggactgat-----aaaaggttgttgcttgttccag
| || |||||||| || ||  |||||||||| || || ||||| ||||| || ||||||||||| ||| | ||||| ||||| |||||||| ||||||||||| | | || |  |     |      |  || |||||  ||  | ||    |   ||| |||   |   | |||    | | |||  |  |      |||  |  |      || |||
TAACAACTGGTGCACGCGAAGCTGCTTTCAGAAATATTAAGACAATTGCTGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAAGGGTCGTCCAACAGgtatacttctaggaattctatgtggaggcattttctgatgtattttattttcttcatctctttcatttttttttattggtgtttgggtttttttaccgaaaaataatactccatttcag

upper sequence: PP1S10_385V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: GLYMA02G26840.1 (Glycine max), 5'ss of exon 4
TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgcttgagacaaccttgttttgtctgaattacatatggcgtcattctgttttgatacctgttacacttctctggactgataaaaggttgttgcttgttccag
| || || ||||| || ||  |||||||||| ||||||||||| ||||| || |||||||| || ||| | ||||| ||||| ||||| || ||||| ||||| | |  |     ||| | | ||   | | |  ||||| |   ||   ||  |||  ||   | |     || | | || | |||        ||     || |||
TAACAACAGGTGCTCGGGAAGCTGCTTTCAGAAACATCAAGACAATTGCTGAATGCTTGGCCGATGAACTTATTAATGCAGCCAAAGGTTCATCCAATAGgtatactttt----gcaatcctattc-atttaacatacatttt-tgtttgtcattttaaatttttttgttggttttgttgaataatat-------ttctcaatttcag

upper sequence: PP1S10_385V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: AT3G11940.2 (Arabidopsis thaliana), 5'ss of exon 4
TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaa-atgcttg-agacaaccttgtt-ttgtctgaattacatatggcgtcattctgttttgatacctgttacacttctctggactgataaaaggttgttgcttgttccag
|||| |||||||| || ||  |||||||||| ||||||||||| || || |||||| | ||||| ||||| || |||||||| || || |||||||||||||||| |  |||  | |  || |   | ||||    || || ||  | |    |     ||||   ||||||    |  | |                             
TTACCACTGGTGCTCGTGAAGCTGCTTTCAGAAACATCAAGACTATAGCTGAGTGCCTTGCTGATGAATTGATCAACGCAGCCAAGGGCTCTTCCAACAGgtaaatacacttccaaatgacttcactattgttcatataacttaaagtgaagctaatgattgaa--ctgttatgtcttgcag-----------------------------

upper sequence: PP1S10_385V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: Vv04s0043g00440.t01 (Vitis vinifera), 5'ss of exon 4
TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaa--atgcttgagaca-accttgttttgtctgaattacatatggcgtcattctgttt--tgatacctgttacacttctctggactgataaaaggttg-ttgcttgttccag------------------
| ||||||||||| || |||||||| ||||||||||||||||| || || || |||||||| || ||| | ||||||||||| || || || |||||||||||||  ||   | ||| | | ||  |      |  ||| ||       ||  | | |||  |||   ||||| | ||  ||||| || |||| | ||||  ||  |||   |                   
TCACTACTGGTGCTCGCGAGTCTGCATTCAGGAACATCAAGACAATAGCTGAATGCTTGGCCGATGAACTCATTAACGCAGCAAAGGGTTCATCCAACAGgtaaaagatagcttagatatatctcttgaaaaatatattgcactgattctctctgtttttagtgagttctgttcc-ctattctggtcttataatatgttggctgactgtgttatattacatgtatatctcag

upper sequence: PP1S10_385V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: Vv08s0007g07220.t01 (Vitis vinifera), 5'ss of exon 4
TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgcttgagacaaccttgttttgtctgaattacatatggcgtcattctgttttgatacctgttacacttctctggactgataaaaggttgttgcttgttccag
| ||||| || || ||||| ||||||||||||||||| ||||| || || || || |||||||| ||| | || || || || ||||| || ||||||||||| ||       | | || || || |  |  | |||   |   |    |||| |  | |  ||  || || || || | | |                         
TCACTACCGGAGCCCGAGAATCTGCTTTCAGGAACATAAAGACAATAGCTGAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaa---aggcccacatttttatacc--atttattcac--ctctgttctctgctaa--ccgtttgcaattatcggcatttcag---------------------

upper sequence: PP1S10_385V6.1 (Physcomitrella patens), 5'ss of exon 3
lower sequence: EDP01658 (Chlamydomonas reinhardtii), 5'ss of exon 6
TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgcttgagacaaccttgttttgtctgaattacatatggcgtcattctgttttgatacctgttacacttct-ctggactgataaaaggttgttgcttgttccag
  || ||||| || || ||| | || ||| | ||||||||||||||||| |||||| ||||||||||  |  | ||||| || || || || ||||||||||      ||    || | |  | |  |   | |||  |   | |   |  | |   |||  |  |   || |  | | ||  || | |    |    |          
--ACCACTGGCGCCCGCGAGGCCGCCTTCCGCAACATCAAGACCATTGCGGAGTGCCTGGCTGACGAGCTGGTGAACGCTGCCAAGGGCTCGTCCAACAGGTgggcgcctgcgtactagcacgatgggctaggattggaggcgccag-aggccgccgtgaggcgggcggcagtggtgccgggttggtcaggcatccaagaaaa------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18341021|gb|BJ173053.1|BJ173053
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTG
EST: gi|18339322|gb|BJ171349.1|BJ171349
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGNGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162264108|gb|FC439962.1|FC439962
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162244226|gb|FC423777.1|FC423777
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|67695036|gb|BJ955269.1|BJ955269
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162278970|gb|FC454709.1|FC454709
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|208388685|gb|DC941512.1|DC941512
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCACCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|37840034|gb|BJ598042.1|BJ598042
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|15320074|gb|BI487619.1|BI487619
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|208359837|gb|DC939253.1|DC939253
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|37828345|gb|BJ586357.1|BJ586357
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|208355680|gb|DC929944.1|DC929944
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|37838797|gb|BJ596805.1|BJ596805
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162259134|gb|FC436428.1|FC436428
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|100446608|gb|CJ970907.1|CJ970907
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162206803|gb|FC382665.1|FC382665
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162209867|gb|FC386009.1|FC386009
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162236902|gb|FC412645.1|FC412645
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162209866|gb|FC386008.1|FC386008
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|67724613|gb|BJ974872.1|BJ974872
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|19782721|gb|BQ039897.1|BQ039897
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162200301|gb|FC376625.1|FC376625
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162264107|gb|FC439961.1|FC439961
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162200276|gb|FC376616.1|FC376616
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|208364441|gb|DC954516.1|DC954516
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCACCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|15327572|gb|BI488326.1|BI488326
EST:     GAGTGCTTGGCTGACAAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATC
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATC
EST: gi|18349401|gb|BJ181450.1|BJ181450
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAA
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAA
EST: gi|162240704|gb|FC416309.1|FC416309
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGG
EST: gi|208391438|gb|DC937586.1|DC937586
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|18334842|gb|BJ166859.1|BJ166859
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGNATGAGATCGAGCGTG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTG
EST: gi|162276868|gb|FC452550.1|FC452550
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|208371313|gb|DC944477.1|DC944477
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162278969|gb|FC454708.1|FC454708
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|100384864|gb|BY969599.1|BY969599
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAAGGC-AATC
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAA-GGCCAATC
EST: gi|7047347|gb|AW477241.1|AW477241
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162260600|gb|FC436604.1|FC436604
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|208361251|gb|DC957720.1|DC957720
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|18362813|gb|BJ194885.1|BJ194885
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAG
EST: gi|208364350|gb|DC950651.1|DC950651
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|208384711|gb|DC907142.1|DC907142
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|208345761|gb|DC921016.1|DC921016
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162276867|gb|FC452549.1|FC452549
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162259135|gb|FC436429.1|FC436429
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162236903|gb|FC412646.1|FC412646
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|19785398|gb|BQ040312.1|BQ040312
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162204887|gb|FC381205.1|FC381205
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|208385149|gb|DC923557.1|DC923557
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|37841325|gb|BJ599333.1|BJ599333
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|67507768|gb|BJ940646.1|BJ940646
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|208400565|gb|DC904541.1|DC904541
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162204142|gb|FC378900.1|FC378900
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTTTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|7583604|gb|AW699513.1|AW699513
EST:     GAGTGCTAGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACTCCATCTAGAAGAACGATGAGATCGAGCGTGTGGCCAACGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162244225|gb|FC423776.1|FC423776
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGTTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|67579044|gb|BJ951195.1|BJ951195
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162235182|gb|FC411265.1|FC411265
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162206802|gb|FC382664.1|FC382664
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162200302|gb|FC376626.1|FC376626
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|7207340|gb|AW561343.1|AW561343
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|208356234|gb|DC918432.1|DC918432
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGNTAAAGGGTCTTCCAACAG                         CTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162215111|gb|FC390749.1|FC390749
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
EST: gi|162216079|gb|FC392912.1|FC392912
EST:     GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAG                         CTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG
genomic: GAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 125

TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgct ... cttgttccagCTACGCCATCAAGAAGAAGGATGAGATCGAGCGTGTGGCCAAGGCCAATCGTTAAGCTAGTTGCAAGATGTTTATTGCATCTGGGAACTCTTTAAATGTT




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgcttgagacaaccttgttttgtctgaattacatatggcgtcattctgttttgatacctgttacacttctctggactgataaaaggttgttgcttgttccag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAGCT